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ORGANIC SPECTROSCOPY

Read all about Organic Spectroscopy on ORGANIC SPECTROSCOPY INTERNATIONAL 

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DR ANTHONY MELVIN CRASTO Ph.D

DR ANTHONY MELVIN CRASTO Ph.D

DR ANTHONY MELVIN CRASTO, Born in Mumbai in 1964 and graduated from Mumbai University, Completed his Ph.D from ICT, 1991,Matunga, Mumbai, India, in Organic Chemistry, The thesis topic was Synthesis of Novel Pyrethroid Analogues, Currently he is working with AFRICURE PHARMA, ROW2TECH, NIPER-G, Department of Pharmaceuticals, Ministry of Chemicals and Fertilizers, Govt. of India as ADVISOR, earlier assignment was with GLENMARK LIFE SCIENCES LTD, as CONSUlTANT, Retired from GLENMARK in Jan2022 Research Centre as Principal Scientist, Process Research (bulk actives) at Mahape, Navi Mumbai, India. Total Industry exp 32 plus yrs, Prior to joining Glenmark, he has worked with major multinationals like Hoechst Marion Roussel, now Sanofi, Searle India Ltd, now RPG lifesciences, etc. He has worked with notable scientists like Dr K Nagarajan, Dr Ralph Stapel, Prof S Seshadri, etc, He did custom synthesis for major multinationals in his career like BASF, Novartis, Sanofi, etc., He has worked in Discovery, Natural products, Bulk drugs, Generics, Intermediates, Fine chemicals, Neutraceuticals, GMP, Scaleups, etc, he is now helping millions, has 9 million plus hits on Google on all Organic chemistry websites. His friends call him Open superstar worlddrugtracker. His New Drug Approvals, Green Chemistry International, All about drugs, Eurekamoments, Organic spectroscopy international, etc in organic chemistry are some most read blogs He has hands on experience in initiation and developing novel routes for drug molecules and implementation them on commercial scale over a 32 PLUS year tenure till date Feb 2023, Around 35 plus products in his career. He has good knowledge of IPM, GMP, Regulatory aspects, he has several International patents published worldwide . He has good proficiency in Technology transfer, Spectroscopy, Stereochemistry, Synthesis, Polymorphism etc., He suffered a paralytic stroke/ Acute Transverse mylitis in Dec 2007 and is 90 %Paralysed, He is bound to a wheelchair, this seems to have injected feul in him to help chemists all around the world, he is more active than before and is pushing boundaries, He has 100 million plus hits on Google, 2.5 lakh plus connections on all networking sites, 100 Lakh plus views on dozen plus blogs, 227 countries, 7 continents, He makes himself available to all, contact him on +91 9323115463, email amcrasto@gmail.com, Twitter, @amcrasto , He lives and will die for his family, 90% paralysis cannot kill his soul., Notably he has 38 lakh plus views on New Drug Approvals Blog in 227 countries......https://newdrugapprovals.wordpress.com/ , He appreciates the help he gets from one and all, Friends, Family, Glenmark, Readers, Wellwishers, Doctors, Drug authorities, His Contacts, Physiotherapist, etc He has total of 32 International and Indian awards

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Flezurafenib


Flezurafenib

CAS 2760321-00-2

MF C26H21FN4O3 MW456.5 g/mol, P26TTM6U27

5-({(3S)-3-[4-(4-fluorophenyl)-1H-imidazol-2-yl]-3,4-dihydro-2H-1-benzopyran-6-yl}oxy)-3,4-dihydro-1,8-naphthyridin-2(1H)-one

5-[[(3S)-3-[5-(4-fluorophenyl)-1H-imidazol-2-yl]-3,4-dihydro-2H-chromen-6-yl]oxy]-3,4-dihydro-1H-1,8-naphthyridin-2-one
rapidly accelerated fibrosarcoma (Raf) kinase inhibitor,
antineoplastic

Flezurafenib is an investigational new drug designed as a rapidly accelerated fibrosarcoma (RAF) kinase inhibitor which is being evaluated for the treatment of cancer. Developed by Jazz Pharmaceuticals, this novel therapeutic agent is currently being explored for its efficacy against solid tumors and hematological malignancies harboring oncogenic mutations that activate the RAS-RAF-MAPK signaling pathway.[1][2] As of January 2025, flezurafenib has reached Phase 1 clinical trials, where it is being evaluated for the treatment of advanced cancers and advanced malignant solid neoplasms.[1]

PAT

WO2022023450]

https://patentscope.wipo.int/search/en/detail.jsf?docId=WO2022023450&_cid=P11-MGN3DV-58095-1

[0402] Example 3. Chiral Synthesis of Compounds A-l and A-2

[0403] A. Synthesis of P2

[0404] Step 1: To a solution of 2,5-dihydroxybenzaldehyde (200 g, 1448 mmol) and pyridinium p-toluenesulfonate (18.2 g, 72.4 mmol) in DCM (3.75 L) was added 3,4-dihydro-2H-pyran (165 mL, 1810 mmol) dropwise over 10 minutes and the reaction temperature warmed to 30 °C. The reaction was stirred for 2 hours and checked by UPLC-MS which indicated the reaction was 92% complete (~5% starting material and ~3% later running unknown). The reaction was stopped. The reaction was washed with water (1.5 L) and the DCM solution was passed through a 750g silica pad and followed through by DCM (2.5 L). The DCM solution was reduced in-vacuo and the crude product was then slowly diluted with Pet. Ether to ~1L total volume, stirred and cooled to -10° C to afford a thick yellow slurry. The product was filtered and washed with Pet. Ether (2 x 150 mL) and pulled dry for 3 hours to afford 2-hydroxy-5-tetrahydropyran-2-yloxy-benzaldehyde (265g, 1192 mmol, 82% yield) as a bright yellow solid. ¾ NMR (400 MHz, DMSO-d6) d/ppm: 10.35 (s, 1H), 10.23 (s, 1H), 7.32 – 7.19 (m, 2H), 6.94 (d, J = 8.9 Hz, 1H), 5.36 (t, J = 3.3 Hz, 1H), 3.77 (ddd, J = 11.2, 8.8, 3.6 Hz, 1H), 3.59 – 3.49 (m, 1H), 1.94 – 1.45 (m, 6H). UPLC-MS (ES+, Short acidic): 1.64 min, m/z 223.0 [M+H]+ (100%).

[0405] Step 2: 2-hydroxy-5-tetrahydropyran-2-yloxy-benzaldehyde (107 g, 481 mmol) was dissolved in diglyme (750 mL) and K2CO3 (133 g, 963 mmol) was added on one portion with stirring to afford a bright yellow suspension. The reaction was then heated to 140°C and tert-butyl acrylate (155 mL, 1059 mmol) in DMF (75 mL) was added over 10 minutes starting at ~110°C and up to 130°C. Maintained this temperature for a further 1 hour. UPLC-MS indicated that the

reaction had progressed 75%. After a further hour this showed clean conversion to 85% product and little or no side-products. After another 3 hours UPLC-MS showed 88% product (previous reactions had showed that further heating did not afford more conversion). The dark brown reaction was cooled to room temperature overnight and filtered to remove inorganics. The reaction was suspended in EtOAc (2.5 L) and water (2.5 L) and the phases separated. The aqueous was re-extracted with EtOAc (2.5 L) and the combined organics were washed with brine (2 x 1.5 L) and the organics were reduced in-vacuo. The crude product was then purified on silica (2Kg) loading in a minimum volume of DCM. A gradient of EtOAc in Pet. Ether (10 – 25%) was run and clean product fractions combined and reduced in-vacuo to afford tert-butyl 6-tetrahydropyran-2-yloxy-2H-chromene-3-carboxylate (93.5 g, 281 mmol, 58% yield) as a yellow solid. ¾ NMR (400 MHz, DMSO-d6) d/ppm: 7.37 (q, J = 1.2 Hz, 1H), 7.05 (d, J = 2.9 Hz, 1H), 6.94 (dd, J = 8.8, 2.9 Hz, 1H), 6.79 (dd, J = 8.7, 0.7 Hz, 1H), 5.35 (t, J = 3.3 Hz, 1H), 4.82 (d, J = 1.4 Hz, 2H), 3.77 (ddt, J = 13.3, 8.3, 4.2 Hz, 1H), 3.59 – 3.48 (m, 1H), 1.93 – 1.49 (m, 6H), 1.49 (s, 9H). UPLC-MS (ES+, Short acidic): 2.18 min, m/z ([M+H]+) not detected (100%).

[0406] Step 3: tert-butyl 6-tetrahydropyran-2-yloxy-2H-chromene-3-carboxylate (215 g, 647 mmol) was suspended in MeOH (1.6 L) at room temperature (did not dissolve immediately) and pyridinium p-toluenesulfonate (16.3 g, 64.7 mmol) added. The reaction was warmed to 40°C with a hot water bath and checked by UPLC-MS for progress after 1 hour which indicated the reaction was complete and was a clear orange solution. The reaction was reduced in-vacuo and the crude product dissolved in DCM (2 L) and washed with water (1 L). The organic layer was dried (MgSC>4), filtered and reduced in-vacuo to afford the crude product as a yellow solid. This was suspended in Pet. Ether and stirred in an ice bath before filtering, to afford a bright yellow solid. This was dried under high vac at 50°C for 2 hours to afford tert-butyl 6-hydroxy-2H-chromene-3-carboxylate (144.4 g, 582 mmol, 90% yield). ¾ NMR (400 MHz, DMSO-d6) d/ppm: 9.17 (s, 1H), 7.33 (s, 1H), 6.76 – 6.64 (m, 3H), 4.77 (d, J = 1.4 Hz, 2H), 1.49 (s, 9H). UPLC-MS (ES+, Short acidic): 1.71 min, m/z 247.2 [M-H]- (100%).

[0407] Step 4: tert-Butyl 6-hydroxy-2H-chromene-3-carboxylate (84. g, 338.34mmol) was dissolved in DCM (500mL) and trifluoroacetic acid (177.72mL, 2320.9mmol) added at room temperature and the reaction stirred to give a brown solution. Initially gas evolution was noted and the reaction was stirred over several days at room temperature. DCM and TFA were removed in-vacuo and finally azeotroped with 200ml of toluene before slurrying with diethyl ether and filtering to give the crude product 6-hydroxy-2H-chromene-3-carboxylic acid (53.15g, 276.58mmol, 81.745% yield) as a cream solid. ¾ NMR (400 MHz, DMSO-d6) d/ppm: 12.77 (s, 1H), 9.14 (s, 1H), 7.37 (t, J = 1.4 Hz, 1H), 6.72 (dd, J = 2.4, 0.9 Hz, 1H), 6.70 – 6.64 (m, 2H), 4.78 (d, J = 1.4 Hz, 2H).

[0408] Step 5: (R)-Phanephos and [RuCl2(p-cym)]2 (1.2: 1 eq., 6.6 mg, 3.0 mg respectively) were weighed into a 50 mL glass lined Parr vessel followed by the substrate (1.845 g, 9.6 mmol). Methanol (16 mL, 0.6 M substrate concentration) was added to the vessel followed by triethylamine (135 μL, 0.96 mmol, 0.1 eq.). A PTFE stirrer bar was added and the thermocouple was covered with PTFE tape. The vessel was sealed and purged with nitrogen 5 times (at ~2 bar) and 5 times with stirring (~500 rpm). The vessel was then purged with hydrogen 5 times (at -10 bar) and 5 times with stirring (~500 rpm). The vessel was then pressurised to 5 bar hydrogen pressure and heated to 40 °C (with 1500 rpm stirring speed). The pressure was kept constant but with venting and refilling to 5 bar after sampling. After 21.5 hours, the vessel was allowed to cool. After 22.5 hours, the vessel was vented and purged with nitrogen. Each -0.1 mL sample was diluted to -1 mL with MeOH for SFC analysis. Work-up procedure: MeOH removed by concentrating under vacuum, followed by addition of EtOAc (10 mL) and 1 M HC1 (10 mL). The layers were mixed before separating. The EtOAc layer was washed with a further portion of 1 M HC1 (4 mL) before removing the aqueous layer to leave the EtOAc organic phase. The aqueous layer was then washed with a further portion of EtOAc (4 mL) and the organic layers were combined. EtOAc was then removed under vacuum to leave behind the product as a greyish solid (See Table 29). P2 is the first eluting product with a retention time of 5.8 min and PI is the second eluting product with a retention time of 6.1 min using the SFC method as described in Example 1.

[0409] B. Synthesis of 5-fluoro-3,4-dihydro-l,8-naphthyridin-2(lH)-one

0410] Step 1: 2-Amino-4-fluoropyridine (400 g, 3568 mmol) was charged into a 10 L fixed reactor vessel and then taken up in DCM (4 L) as a slurry under nitrogen atmosphere. To this was added DMAP (43.6 g, 357 mmol) and cooled to 10°C. Di-tert-butyldicarbonate (934 g, 4282 mmol) was added, as a solution in DCM (1 L), over the space of 1.5 hours. The reaction was stirred at room temperature for 2 hours after which time the complete consumption of the starting material was evident by NMR. To the reaction was added N,N-dimethylethylenediamine (390 mL, 3568 mmol) and the reaction warmed to 40°C overnight (converting any di-BOC material back to the mono-BOC desired product). Allowed to cool to room temperature and then diluted with further DCM (2 L) and washed with water (2 L). Extracted with further DCM (2 L), washed with water

(1 L), brine (1.2 L) and dried (MgSO4) before filtering. The solvents were removed in-vacuo and the resultant product was slurried in DCM/Pet. Ether (1:1) (500 mL). Filtered, washed with further Pet. Ether and pulled dry to afford tert- butyl N-(4-fluoro-2-pyridyl)carbamate (505 g, 2380 mmol, 67% yield) as a cream solid product. A second crop of material was isolated from the mother liquors after passing through a short pad of silica followed by trituration with DCM/Pet. Ether (1:1) (-200 mL) to afford tert-butyl N-(4-fluoro-2-pyridyl)carbamate (46.7 g, 220 mmol, 6% yield). ¾ NMR (400 MHz, DMSO-d6) d/ppm: 10.13 (d, J = 1.7 Hz, 1H), 8.26 (dd, J = 9.4, 5.7 Hz, 1H), 7.60 (dd, J = 12.3, 2.4 Hz, 1H), 6.94 (ddd, J = 8.2, 5.7, 2.4 Hz, 1H), 1.47 (s, 9H). UPLC-MS (ES+, Short acidic): 1.64 min, m/z 213.1 [M+H]+ (98%).

[0411] Step 2: tert-butyl-N-(4-fluoro-2-pyridyl)carbamate (126 g, 594 mmol) and TMEDA (223 mL, 1484 mmol) were taken up in dry THF (1.7 L) and then cooled to -78°C under nitrogen atmosphere. To this solution was added n-butyllithium solution (2.5M solution in hexanes) (285 mL, 713 mmol) and then allowed to stir for a further 10 minutes. sec-Butyllithium solution (1.2M in cyclohexane) (509 mL, 713 mmol) was added keeping the reaction temperature below -70°C whilst stirred for 1 hour. After this time, Iodine (226 g, 891 mmol) in THF (300 mL) was added slowly and dropwise over 30 minutes to keep the temp below -65°C. Stirred at -70°C for another 10 minutes and then quenched by the addition of sat. aq. NH4CI solution (400 mL) and then a solution of sodium thiosulphate (134 g, 848 mmol) dissolved in water (600 mL). This addition raised the temperature to — 25°C. The reaction was warmed to room temperature then transferred to the 5L separator and extracted with EtOAc (2 x 1.5 L) and then washed with brine (500 mL), dried (MgSCL) and then evaporated in vacuo to afford crude material (~200g). This was taken up in hot DCM (500 mL) (slurry added to the silica pad) and then passed through a 2Kg silica pad. Washed through with DCM (10 x 1 L fractions) and then the product was eluted from the column with EtOAc in Pet. Ether (10% to 100%), (1 L at each 10% increase, with 1 L fractions). This gave 2 mixed fractions and clean product containing fractions, which were combined and evaporated in vacuo to afford tert-butyl N-(4-fluoro-3-iodo-2-pyridyl)carbamate (113.4 g, 335.4 mmol, 57% yield) as a white solid. Clean by UPLC-MS and NMR. The mixed fractions were combined with previous crude material to afford 190g in total of a cream solid that was composed of -50% of the desired product. This was re-columned as above to afford a combined second crop from all 4 batches as a cream solid tert-butyl N-(4-fluoro-3-iodo-2-pyridyl) carbamate (107.5 g, 318 mmol, 54% yield). ¾ NMR (400 MHz, DMSO-d6) d/ppm: 9.47 (s, 1H), 8.33 (dd, J = 8.7, 5.5 Hz, 1H), 7.19 (dd, J = 7.3, 5.5 Hz, 1H), 1.46 (s, 9H). UPLC-MS (ES+, Short acidic): 1.60 mm, m/z 339.1 [M+H]+ (100%).

[0412] Step 3: tert-butyl N-(4-fluoro-3-iodo-2-pyridyl)carbamate (300 g, 887 mmol), 3,3-dimethoxyprop- 1 -ene (137 mL, 1153 mmol) and DIPEA (325 mL, 1863 mmol) were suspended in DMF (2 L) and water (440 mL) to give a yellow slurry. This was degassed for 20 minutes at 30°C. To this mixture was then added Palladium (II) acetate (19.92 g, 89 mmol) in one portion and degassed again for a further 15mins. The reaction was slowly and carefully heated to 100°C. Gas evolution at around 85°C (large volumes of off gassing, presumably due to the loss of Boc group as CO2 and isobutylene). The reaction became darker once off gassing finished and full solubility achieved. The reaction was then heated at 100°C for 3 hours and checked by UPLC-MS (70% desired product, 18% un-cyclised intermediate and 7% des-iodo BOC). The reaction was heated for a further 2 hours and this showed 81% desired product, 12% un-cyclised intermediate and 8% des-iodo BOC. After 7 hours the reaction showed 89% desired product, 4% un-cyclised

intermediate and 7% des-iodo BOC. The reaction was heated overnight. The reaction solution was cooled and filtered through celite and evaporated in-vacuo to a thick dark orange slurry which was then suspended in water (1 L) and acidified to pH~l-2 with aq. HC1 (4N) solution. This was then basified to pH~9 with sat. aq. Na2CO3 solution. Extracted with DCM (2 x 2L) and washed with brine and dried (MgS04). EtOAc (2 L) was added to the solution and then the organics were passed through a 500g silica plug. This was then followed by DCM/EtOAc (1 : 1) (2 L) and finally EtOAc (2 L) (the final wash through contained only baseline). The product containing fractions were combined and reduced in-vacuo to give an orange slurry and then suspended in hot diethyl ether (300 mL), cooled back to ~10°C in an ice bath with stirring before being filtered and washed with 150 mL of ice cold diethyl ether. Pulled dry to afford 5-fluoro-3,4-dihydro-lH-l,8-naphthyridin- 2-one (58.4 g, 351.5 mmol, 39.6 % yield) as a cream fluffy solid. ¾ NMR (400 MHz, DMSO-d6) d/ppm: 10.69 (s, 1H), 8.29 – 7.90 (m, 1H), 6.92 (dd, J = 8.8, 5.7 Hz, 1H), 2.88 (dd, J= 8.3, 7.1 Hz, 2H), 2.57 – 2.47 (m, 2H). UPLC-MS (ES+, Short acidic): 1.04 mm, m/z 167.0 [M+H]+ (100%).

[0413] C. Synthesis of Compounds A-l and A-2

[0414] Step 1: Potassium carbonate (832mg, 6.02mmol) was added to a stirred solution of 5- fluoro-3,4-dihydro-lH-l,8-naphthyridin-2-one (250mg, 1.5mmol), P2 (see step A, 292mg, 1.5mmol; 85% ee) and DMSO (2mL) at room temperature. The reaction was degassed and flushed with nitrogen 3 times before being stirred under a nitrogen atmosphere for 18 hours at 100°C. The reaction mixture was cooled to room temperature and diluted with water (20mL) and the resulting mixture extracted with EtOAc (20mL). A solution of citric acid (1156.3mg, 6.02mmol) in water (lOmL) was then added to the aqueous layer resulting in a solid precipitate which was filtered and dried in vacuo to give (S)- or (R)-6-[(7-oxo-6, 8-dihydro- 5H-1 ,8-naphthyridin-4-yl)oxy]chromane-3 -carboxylic acid (345mg, 1.01 mmol, 67% yield) as a white solid. UPLC-MS (ES+, Short acidic): 1.29 mm, m/z 341.1 [M+H]+. ¾ NMR (400 MHz, DMSO-d6) d/ppm: 12.71 (lH, br s), 10.47 (1H, s), 7.95 (1H, d, J = 6.0Hz), 6.97 (1H, d, J = 2.4Hz), 6.89 (1H, dd, J = 8.4Hz, 2.4Hz), 6.83 (1H, d, J = 8.4Hz), 6.24 (1H, d, J = 6.0Hz), 4.33 (1H, dd, J = 11.2Hz, 3.2Hz), 4.15 (1H, dd, J = 11.2Hz, 7.2Hz), 3.05-2.89 (5H, m), 2.53 (2H, t, J = 7.6Hz).

[0415] Step 2: Propylphosphonic anhydride (0.91mL, 1.52mmol) was added to a stirred solution of (S)-6-[(7-oxo-6,8-dihydro-5H-l,8-naphthyridin-4-yl)oxy]chromane-3-carboxylic acid (345mg, 1.01 mmol), 2-amino- l-(4-fluorophenyl)ethanone hydrochloride (288mg, 1.52mmol), N,N-diisopropylethylamine (0.88mL, 5.07mmol) andDCM (lOmL) at room temperature. After stirring for 2 hours the reaction was complete by LCMS. Water (50mL) and DCM (50mL) were added and the organic layer separated and washed with sat. aq. Na2CO3 (50mL). The organic layer was dried over sodium sulfate and solvent removed in vacuo. The residue was purified by column chromatography using an eluent of 0-5% MeOH in DCM to give (S)- or (R)-N-[2-(4-fluorophenyl)-2-oxo-ethyl]-6-[(7-oxo-6,8-dihydro-5H-l,8-naphthyridin-4-yl)oxy]chromane-3-carboxamide (300mg, 0.63mmol, 62% yield) as a yellow solid. UPLC-MS (ES+, Short acidic): 1.52 mm, m/z 476.4 [M+H]+. ¾ NMR (400 MHz, DMSO-d6) d/ppm: 10.47 (1H, s), 8.60-8.54 (1H, m), 8.08 (1H, dd, J = 8.8Hz, 5.6Hz), 7.95 (1H, d, J = 5.6Hz), 7.41-7.37 (2H, m), 7.01-6.97 (1H, m), 6.90 (1H, dd, J = 8.8Hz, 3.2Hz), 6.86 (1H, d, J = 8.8Hz), 6.25 (1H, d, J = 5.6Hz), 4.65 (2H, d, J = 6.0Hz), 4.42-4.35 (1H, m), 3.96 (1H, t, J = 9.6Hz), 3.03-2.87 (5H, m), 2.55-2.52 (2H, m), 1 exchangeable proton not seen.

[0416] Step 3: (S)- or (R)-N-[2-(4-fluorophenyl)-2-oxo-ethyl]-6-[(7-oxo-6, 8-dihydro- 5H-1, 8-naphthyridin-4-yl)oxy]chromane-3 -carboxamide (300mg, 0.63mmol), ammonium acetate

(1216mg, 15.77mmol) and acetic acid (5mL) were combined in a sealable vial, the vial sealed and the reaction stirred and heated to 130°C for 18 hours after which time the reaction was complete by LCMS. The reaction was cooled to room temperature and AcOH removed in vacuo. DCM (50mL) was added to the residue and sat. aq. Na2CO3 (50mL) added. The organic layer was separated and washed with brine, dried over sodium sulfate and solvent removed in vacuo. The residue was purified by column chromatography using an eluent of 0-10% MeOH in DCM to give (R)- or (S)-5 – [3 – [4-(4-fluorophenyl)- 1 H-imidazol-2-y 1] chroman-6-yl] oxy-3 ,4-dihydro- 1 H- 1 , 8-naphthyridin-2-one (141mg, 0.31mmol, 49% yield) as a yellow solid.

[0417] Chiral LCMS of the product, together with chiral LCMS’s of Compounds A-l and A-2 showed that this product is predominantly Compounds A-l (Fig. 7), with a similar ee to that of the starting acid (85% ee), however accurate analysis cannot be done due to overlap of the peaks. UPLC-MS (ES+, Short acidic): 1.36 mm, m/z 457.2 [M+H]+. Ή NMR (400 MHz, DMSO-d6) d/ppm: 12.31 (0.2H, s), 12.10 (0.8H, s), 10.47 (1H, s), 7.96 (1H, d, J = 6.0Hz), 7.80-7.75 (1.8H, m), 7.69-7.65 (0.2H, m), 7.59-7.78 (0.8H, m), 7.29-7.23 (0.4H, m), 7.19-7.13 (1.8H, m), 7.03-7.00 (1H, m), 6.92 (1H, dd, J = 8.8Hz, 2.8Hz), 6.89 (1H, d, J = 8.8Hz), 6.27 (1H, d, J = 6.0Hz), 4.55-4.48 (1H, m), 4.16-4.09 (1H, m), 3.44-3.36 (1H, m), 3.30-3.21 (1H, m), 3.16-3.09 (1H, m), 2.94 (2H, t, J = 7.2Hz), 2.54 (2H, t, J = 7.2Hz).

[0439] A. Synthesis of P2

[0440] Step 1: 2,5-Dihydroxybenzaldehyde (13.6 kg, 98.18 mol) was dried using 2 x azeotropic concentrations with 2 x 125-130 kg of THF at up to 35 °C, concentrating under vacuum to 27-41 kg each time. The THF was then removed using 4 x azeotropic concentrations with 4 x 179-187 kg of DCM at up to 35 °C, concentrating under vacuum to 27-41 kg each time. The concentrate was diluted with DCM (284 kg) and pyridine p-toluenesulfonate (PPTS; 1.25 kg, 4.97 mol) was added. 3,4-dihydro-2H-pyran (10.4 kg, 123.63 mol) was added slowly at between 25-35 °C and the reaction was stirred at 30 °C for 90 minutes. The mixture was added to a solution of Na2CO3 (7.1 kg) in water (138 kg) at -15 °C and allowed to warm to 25 °C and then stirred for 6 h. The mixture was filtered through Celite® (33 kg), washing with DCM (92.5 kg). The filtrate was allowed to stand for 1 h and then the organic phase was separated and concentrated to 27-41 kg.

The DCM was then removed using 3 x azeotropic concentrations with 3 x 105 kg n-heptane at up to 35 °C, concentrating under vacuum to 27-41 kg each time. The concentrate was diluted with n- heptane (210 kg) and the heated to 30-40 °C and stirred for 6 h. The solution was then cooled to – 5 to -15 °C over 4 h, stirred for 9 h and filtered, washing the filter cake with n-heptane (39.5 kg).

The wet cake was dried at 30-40 °C for 24 h in vacuo to give 2-hydroxy-5-(oxan-2- yloxy)benzaldehyde (9.38 kg, 40.6%). Additional product (8.00 kg, 34.3%) was recovered by dissolving solid attached to the walls of the reaction vessel with 42 kg DCM and concentrating the resultant solution in vacuo to give a further 8.00 kg (34.3% yield ) of product to give a total yield of 74.9% (17.38 kg). LCMS (ES-): 15.18 mm, m/z 221.12 [M-H]-.

[0441] Step 2: To a stirring solution of 2-hydroxy-5-(oxan-2-yloxy)benzaldehyde (16.95 kg, 76.27 mol) in diglyme (113.4 kg) was added K2CO3 (21.4 kg, 154.83 mol) and the mixture was heated to between 80-90 °C. Tert-butyl prop-2-enoate (20.0 kg, 156.04 mol) was added, and the mixture was heated to between 120-130 °C and stirred for 18 hr. The mixture was cooled and

filtered, and the filter cake washed with EtOAc (80.0 kg). The filtrate was diluted with EtOAc (238.0 kg) and water (338.0 kg) and stirred for 1 hr at 20-30 °C, then stood for 2 hr. The mixture was filtered through Celite® (40.0 kg), and the filter cake washed with EtOAc (84.0 kg). The filtrate was left to stand for 2 hr and the aqueous layer was extracted with EtOAc (312.0 kg), stirring for 1 hr at 0-30 °C and standing for 2 hr. The organic layers were combined and washed with 2 x 345 kg water, stirring at between 20-30 °C for 1 hr and standing for 2 hr for each wash. The combined organics were then concentrated to 182.4 kg maintaining the temperature below 50 °C under vacuum. This gave the product tert-butyl 6-(oxan-2-yloxy)-2H-chromene-3-carboxylate as a 9.3% solution in diglyme/EtOAc (66.9% yield) and was used in the next stage without further isolation. LCMS (ES-): 20.26 mm, m/z 247.12 [M-THP]-.

[0442] Step 3: Tert-butyl 6-(oxan-2-yloxy)-2H-chromene-3-carboxylate (16.9 kg, 50.84 mol) as a 181.8 kg solution in diglyme/EtOAc was concentrated to 68 kg under vacuum at 50 °C. TFA (110.3 kg, 1002.46 mol) was added and the reaction was warmed to 40 °C under nitrogen flow and then stirred for 8 hrs. The mixture was then diluted with DCM (222.0 kg) and cooled to between -5 and -15 °C, and then stirred for 7 hrs. The solid was filtered and the filter cake washed with DCM (67.0 kg). The wet cake was dried for 24 hr under vacuum at between 30-40 °C to give 6-hydroxy-2H-chromene-3-carboxylic acid (8.75 kg, 78.5% yield). LCMS (ES-): 0.85 min, m/z 191.11 [M-H]-.

[0443] Step 4: To a stirring solution of 6-hydroxy-2H-chromene-3-carboxylic acid (7.19 kg, 37.4 mol) in N2-degassed EtOH (60 kg) was added (R)-Phanephos (131 g, 0.227 mol), [RuCl2(p-cym)]2 (70 g, 0.114 mol), and Et3N (5.6 kg, 55.3 mol). The reaction atmosphere was replaced with 3 x N2 and then 3 x H2, adjusting the H2 pressure to between 0.5-0.6 MPa, and then stirred for 18 hrs at 40 °C. The atmosphere was then replaced with 3 x N2 and then 3 x H2, adjusting the H2 pressure to between 0.5-0.6 MPa again and the mixture was stirred for a further 18 hrs.

[0444] The mixture was concentrated in vacuo to ca. 30 kg at no more than 40 °C. The reaction was diluted with MTBE (53 kg) and cooled to between 15-25 °C. 5% Na2CO3 (80 kg) was added dropwise, and the mixture was stirred for 2 hrs and stood for 2 hrs at between 15-25 °C. The aqueous layer was collected and 5% Na2CO3 (48 kg) was added to the organic layer, then stirred for 2 hrs at 15-25 °C and filtered through Celite® (10.0 kg). The wet cake was washed with water (20 kg) and the combined aqueous filtrate and aqueous layer were diluted with IP Ac (129.0 kg). The pH of the mixture was adjusted to 1-3 with dropwise addition of 6 N HC1 (29 kg) at 15-25 °C and stirred for 2 hrs. The mixture was filtered through Celite® (10 kg), washing the filter cake with IP Ac (34 kg) and the filtrate was left to stand for 2 hrs at 15-25 °C. The aqueous layer was then extracted with IP Ac (34 kg) and the combined organic layers were concentrated to ca. 35 kg under vacuum at no more than 40 °C. Me-cyclohexane (21 kg) was added dropwise at 15-25 °C and concentrated to ca. 35 kg under vacuum at no more than 40 °C. Further Me-cyclohexane (20 kg) was added dropwise at 15-25 °C and stirred for 3 hrs. The mixture was then stirred at 40-50 °C for 4 hrs and cooled to 15-25 °C over 3 hrs and then stirred for a further 2 hrs.

[0445] The mixture was then filtered, washing the filter cake with 16.4 kg of IPAc/Me-cyclohexane (1/4, v/v). The wet cake was dried for 24 hrs at 35-45 °C under vacuum to give (3R)-6-hydroxy-3,4-dihydro-2H-l-benzopyran-3-carboxylic acid (5.2 kg, 68.6% yield, chiral purity 95.5%). Further product was isolated by rinsing solid from the reaction vessel wall with EtOH (42 kg) and concentrating to dryness. The resulting solid was suspended in IP Ac (875mL) and Me-cyclohexane (2625mL) and stirred for 5 h at 40 °C and then cooled to 20 °C over 2 h and stirred for 16 h and filtered. The filter cake was then split into 2 equal batches and each batch suspended in IP Ac (912mL) and Me-cyclohexane (2737mL). The resulting mixtures were stirred at 45 °C for 18 h and then filtered and the filter cake dried at 45 °C to give (3R)-6-hydroxy-3,4-dihydro-2H-l-benzopyran-3 -carboxylic acid (1.27 kg, 17% yield, chiral purity 96.2%). LCMS (ES-): 1.74 min, m/z 193.03 [M-H]-.

[0446] Chiral resolution to improve chiral purity:

[0447] (3R)-6-Hydroxy-3,4-dihydro-2H-l-benzopyran-3-carboxylicacid (P2; 5.94 kg, 30.59 mol) (chiral purity =95.5%) was dissolved in IP Ac (138.2 kg) and stirred for 2 hrs at 20-30 °C. The solution obtained was filtered through Celite® (12 kg), washing through with IP Ac (25 kg). In a separate vessel, (S)-(+)-2-phenylglycinol (4.4 kg, 32.07 mol) was dissolved in IP Ac (56 kg), stirring for 1 hr at 40-50 °C. The filtrate was added to this solution over 4 hrs at 40-50 °C, and stirred for 1 hr. The mixture was then stirred for 1 hr at 15-25 °C, and concentrated to ca. 120 kg under vacuum at no more than 40 °C. The concentrate was stirred for 3 hrs at 15-25 °C and filtered, washing through with IP Ac (12 kg) (chiral purity = 96.2%).

[0448] The wet cake was redissolved in EtOH (29 kg), heated to 40-50 °C and diluted with IP Ac (64 kg). 30 g of dry product was added and stirred for 30 min at 15-25 °C. The mixture was concentrated to ca. 42 kg under vacuum at no more than 40 °C, and rediluted with IP Ac (64 kg). This step was repeated two additional times, then stirred at 40-50 °C for 8 hrs. The mixture was filtered, washing through with IP Ac (13 kg) (chiral purity = 97.7%). This recrystallisation process was repeated two further times, for a total of 3 recrystallisation rounds to give material with 98.9% chiral purity.

[0449] The wet cake (10.7 kg) was then dissolved in IN HC1 (45.4 kg) and stirred for 1 hr at 20-30 °C. The mixture was filtered through Celite® (11.5 kg), washing through with IP Ac (28 kg). The aqueous layer was extracted with IP Ac (28.8 kg) and the combined organic layers were washed with water (30 kg), then concentrated to ca. 24 kg at 40 °C under vacuum. Me-cyclohexane (19 kg) was added at 20 °C and the mixture was concentrated to ca. 24 kg at 40 °C under vacuum. This step was repeated twice more. The concentrate was diluted with Me-cyclohexane (29 kg) and stirred for 1 hr at 15-25 °C. The mixture was filtered, and the wet cake was rinsed with Me-Cyclohexane (59 kg). The wet cake was dried under vacuum at 35-45 °C for 16 hrs to give (3R)-6-hydroxy-3,4-dihydro-2H-l-benzopyran-3-carboxylic acid (3.02 kg, 50.2% yield).

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=US350349340&_cid=P11-MGN37Z-55206-1

PAT

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Clinical data
Other namesJZP-815
Identifiers
IUPAC name
CAS Number2760321-00-2
PubChem CID162772363
IUPHAR/BPS13233
UNIIP26TTM6U27
KEGGD13132
Chemical and physical data
FormulaC26H21FN4O3
Molar mass456.477 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  “JZP-815”PatSnap.
  2.  Riaud M, Maxwell J, Soria-Bretones I, Dankner M, Li M, Rose AA (February 2024). “The role of CRAF in cancer progression: from molecular mechanisms to precision therapies”. Nature Reviews. Cancer24 (2): 105–122. doi:10.1038/s41568-023-00650-xPMID 38195917.

///////////flezurafenib, JZP-815, JZP 815, P26TTM6U27, ANTINEOPLASTIC, CANCER

Epsametostat


Epsametostat

CAS 2202678-06-4

MF C31H36F3N7O3 MW611.7 g/mol

N-[(4-methoxy-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl]-6-methyl-1-(6-methylpyridazin-3-yl)-5-{(1R)-1-[4-(2,2,2-trifluoroethyl)piperazin-1-yl]ethyl}indolizine-7-carboxamide

N-[(4-methoxy-6-methyl-2-oxo-1H-pyridin-3-yl)methyl]-6-methyl-1-(6-methylpyridazin-3-yl)-5-[(1R)-1-[4-(2,2,2-trifluoroethyl)piperazin-1-yl]ethyl]indolizine-7-carboxamide
histone N-methyltransferase inhibitor, antineoplastic, Shanghai Haihe Pharmaceutical, HH 2853, (R)-HH2853

Epsametostat is an investigational new drug that is being evaluated for the treatment of peripheral T-cell lymphoma. It is a EZH1/EZH2 inhibitor developed by Shanghai Haihe Pharmaceutical Research & Development Co., Ltd.[1][2][3]

PAT

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=WO2018045971&_cid=P22-MGK809-27208-1

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References

  1.  An R, Li YQ, Lin YL, Xu F, Li MM, Liu Z (February 2023). “EZH1/2 as targets for cancer therapy”. Cancer Gene Therapy30 (2): 221–235. doi:10.1038/s41417-022-00555-1PMID 36369341.
  2.  Wei L, Mei D, Hu S, Du S (August 2024). “Dual-target EZH2 inhibitor: latest advances in medicinal chemistry”Future Medicinal Chemistry16 (15): 1561–1582. doi:10.1080/17568919.2024.2380243PMC 11370917PMID 39082677.
  3.  “Epsametostat”PatSnap.
Clinical data
Other namesHH2853
Identifiers
IUPAC name
CAS Number2202678-06-4
PubChem CID134340937
ChemSpider115010245
UNIIP8U5JF6NBY
Chemical and physical data
FormulaC31H36F3N7O3
Molar mass611.670 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

//////////Epsametostat, histone N-methyltransferase inhibitor, antineoplastic, Shanghai Haihe Pharmaceutical, HH 2853, (R)-HH2853

Envudeucitinib


Envudeucitinib

CAS 2417135-66-9

MF C22H18[2]H6N6O3 MW426.5 g/mol

N-[4-{2-methoxy-3-[1-(2H3)methyl-1H-1,2,4-triazol-3-yl]anilino}-5-(3,3,3-2H3)propanoylpyridin-2-yl] cyclopropanecarboxamide

N-(4-(2-methoxy-3-(1-(trideuteriomethyl)-1,2,4-triazol-3-yl)anilino)-5-(3,3,3-trideuteriopropanoyl)pyridin-2-yl)cyclopropanecarboxamide

N-[4-[2-methoxy-3-[1-(trideuteriomethyl)-1,2,4-triazol-3-yl]anilino]-5-(3,3,3-trideuteriopropanoyl)pyridin-2-yl]cyclopropanecarboxamide
Janus kinase inhibitor, anti-inflammatory, Fronthera U.S. Pharmaceuticals, psoriasis, FTP 637

Envudeucitinib is an investigational new drug that is being evaluated for the treatment of psoriasis. It is a selective tyrosine kinase 2 (TYK2) inhibitor developed by Fronthera U.S. Pharmaceuticals LLC and now owned by Alumis, Inc. for the treatment of autoimmune diseases. Envudeucitinib targets the TYK2 signaling pathway, which plays a crucial role in regulating multiple pro-inflammatory cytokines such as IL-12IL-23, and type I interferons.[1][2]

PAT

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=WO2024081603&_cid=P11-MGGDZU-88200-1

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=WO2023227946&_cid=P11-MGGE36-91523-1

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Clinical data
Other namesFTP-637
Identifiers
IUPAC name
CAS Number2417135-66-9
PubChem CID158715582
IUPHAR/BPS13205
UNIIKD2MDJ4GAB
KEGGD13123
Chemical and physical data
FormulaC22H18D6N6O3
Molar mass426.506 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  Deng L, Wan L, Liao T, Wang L, Wang J, Wu X, et al. (August 2023). “Recent progress on tyrosine kinase 2 JH2 inhibitors”. International Immunopharmacology121 110434. doi:10.1016/j.intimp.2023.110434PMID 37315371.
  2.  Loo WJ, Turchin I, Prajapati VH, Gooderham MJ, Grewal P, Hong CH, et al. (2023). “Clinical Implications of Targeting the JAK-STAT Pathway in Psoriatic Disease: Emphasis on the TYK2 Pathway”. Journal of Cutaneous Medicine and Surgery27 (1_suppl): 3S – 24S. doi:10.1177/12034754221141680PMID 36519621.

////////Envudeucitinib, Janus kinase inhibitor, anti-inflammatory, Fronthera U.S. Pharmaceuticals, psoriasis, FTP 637

Darbinurad


Darbinurad

CAS 1877347-38-0

MF C18H16N2O2S MW 324.4 g/mol

[1-({[3-(4-cyanophenyl)pyridin-4-yl]sulfanyl}methyl)cyclopropyl]acetic
acid

2-[1-[[3-(4-cyanophenyl)-4-pyridinyl]sulfanylmethyl]cyclopropyl]acetic acid
urate transporter inhibitor, AYFFM7L5F0

Darbinurad is a investigational new drug that is being evaluated for the treatment of gout. It is a selective urate transporter 1 (URAT1) inhibitor that blocks the reabsorption of uric acid within the renal proximal tubule, thereby reducing serum uric acid concentrations.[1][2]

Uric acid is the final metabolite of diet and purine in human body. In vivo environment (pH 7.4, 37 degrees), uric acid is present in blood mainly in the form of sodium salt of uric acid, the serum uric acid value of normal people is generally lower than 6 mg/dL. When uric acid in serum exceeds 7 mg/dL (Shi, et al., Nature 2003, 425: 516-523), sodium salt of uric acid will crystallize out and precipitate on joints and other parts of the body, and result in disorders such as gout, urinary stones, kidney stones, etc. Patients with gout are often accompanied with other complications, including hypertension, diabetes, hyperlipidemia, dyslipidemia, atherosclerosis, obesity, metabolic disease, nephropathy, cardiovascular disease, and respiratory disease, etc. (Rock, Et al., Nature Reviews Rheumatology 2013, 9: 13-23). In 2002, Japanese scientists Endou group reported that anion transport channel protein URAT1 is a major protein responsible for reabsorption of uric acid in kidney, they also found that the blood uric acid in people with URAT1 gene mutation (causing the synthesis of such protein being interrupted, inducing nonfunctional proteins) is only one-tenth of that in normal people (Enomoto et. al., Nature 2002 417: 447-452). These findings in human genetics demonstrate that URAT1 anion transport protein in kidney plays very important role in concentration of uric acid in blood, and indicates that URAT1 is a very good and specific target of a drug for reducing blood uric acid.
      The main objective in the treatment of gout and its complications caused by higher level of blood uric acid is to reduce blood uric acid to lower than 6 mg/dL, the main methods are as follows: 1) to inhibit the generation of uric acid, such as allopurinol, febuxostat, which are drugs for inhibiting Xanthine oxidase; 2) to inhibit the reabsorption of uric acid, such as benzbromarone and probenecid, and lesinurad which is currently in clinical research, all of which are drugs for inhibiting kidney URAT1 anion transport channel protein.
      In addition to URAT1, there are other cation transport channel proteins in kidney, such as Glut9 and OAT1 etc., which are also found to be able to reabsorb uric acid back to blood from renal tubules. Kidney is a major excretion pathway of uric acid in human body (70%), intestinal system (via ABCG2 etc.,) is responsible for excreting approximate 30% of uric acid (Sakurai, et. al., Current Opinion in Nephology and Hypertension 2013, 22: 545-550).
      Human urate anion transporter 1, hURAT1, a member of anion transporter family, is located at luminal surface side of epithelial cells of renal proximal convoluted tubules, mainly participates in the reabsorption of uric acid in renal proximal convoluted tubules. URAT1 accomplishes reabsorption of uric acid and excretion of small amount of uric acid by exchanging univalent anions within cells with uric acid in lumens. Anion transport channel proteins located in renal proximal convoluted tubules also comprise anion transport channel protein OAT4, which has 42% of similarity with URAT1 (amino acids of protein). Therefore, generally, a potent URAT1 inhibitor will also inhibit OAT4 and some other anion transport channel proteins.
      At present, all the clinical drugs for reducing blood uric acid have some side effects, for example, allopurinol will cause life-threatening hypersensitivity in some populations, febuxostat has cardiovascular side effects, and benzbromarone has liver toxicity and has been taken back by Sanofi from some markets. Therefore, it is urgent to search for novel, efficient and low-toxic drugs for reducing blood uric acid, and this will have great clinical significance and application prospects.
      Thioacetate compounds have been reported in the prior art, e.g., a class of phenylthioacetate compounds were reported in CN102939279A, a class of thioacetate compounds were reported in CN103068801A, wherein thioacetate compounds in CN103068801A are obtained from the compounds in CN102939279A by essentially replacing carbons of benzene groups in skeletons of the compounds in CN102939279A with 1 to 4 N atoms.

PAT

US9856239,

https://patentscope.wipo.int/search/en/detail.jsf?docId=US209029213&_cid=P21-MGDFSK-15618-1

Example 12: Synthesis of Compound 20

Step 1: Synthesis of 4-(4-chloropyridin-3-yl)benzonitrile (20-b)

      3-bromo-4-chloropyridine (573 mg, 3 mmol), aqueous solution of sodium carbonate (6 mL, 12 mmol, 2 M), 4-cyanophenylboronic acid (441 mg, 3 mmol) and tetrakis(triphenylphosphine)palladium (0) (173 mg, 0.15 mmol) were added to dioxane (18 mL) in a single-necked flask (50 mL), and then purged with nitrogen 3 times, the mixture was heated to 80° C. and reacted for 5 hours. The reaction solution was cooled, added with ethyl acetate (100 mL), and washed with water (100 mL) and brine (100 mL). The organic phase was dried, filtered, concentrated, and purified by preparative silica gel plate (ethyl acetate/petroleum ether: 1/4) to yield a yellow solid product.

Step 2: Synthesis of methyl 2-(1-(((3-(4-cyanophenyl)pyridin-4-yl)thio) methyl)cyclopropyl)acetate (20-c)

      Methyl 2-(1-(mercaptomethyl)cyclopropyl)acetate (840 mg, 5.25 mmol), potassium carbonate (1.45 g, 10.5 mmol) and 4-(4-chloropyridin-3-yl) benzonitrile (450 mg, 2.1 mmol) were dissolved in dimethyl formamide (20 mL) in a single-necked flask (50 mL), the mixture was heated to 130° C. and reacted for 0.5 hour. The reaction solution was cooled, added with ethyl acetate (100 ml), and washed with water (100 ml) and brine (100×3 mL). The organic phase was dried, filtered, concentrated, and purified by preparative silica gel plate (ethyl acetate/petroleum ether: 1/2) to yield a yellow oily product.

Step 3: Synthesis of 2-(1-(((3-(4-cyanophenyl)pyridin-4-yl)thio)methyl) cyclopropyl)acetic acid (20)

      Methyl 2-(1-(((3-(4-cyanophenyl)pyridin-4-yl)thio)methyl)cyclopropyl) acetate (67 mg, 0.2 mmol) and aqueous solution of sodium hydroxide (0.5 mL, 0.5 mmol, 1 M) were added to methanol (3 mL) in a single-necked flask (50 mL), and the mixture was reacted at room temperature for 5 hours. The reaction solution was adjusted to pH=3 with concentrated hydrochloric acid, concentrated and purified by preparative reverse-phase chromatography to yield a white solid product.
      LC-MS (ES, m/z): 325 [M+H] +; H-NMR (400 MHz, CDCl 3, ppm): δ 8.42 (s, 1H), 8.24 (s, 1H), 7.75 (d, J=8.4 Hz, 2H), 7.53 (d, J=8.4 Hz, 2H), 7.35-7.33 (m, 1H), 3.19 (s, 2H), 2.38 (s, 2H), 0.62-0.60 (m, 4H).

PAT

Carboxylic acid compound, method for preparation thereof, and use thereof

Publication Number: KR-102474640-B1, Priority Date: 2014-08-13, Grant Date: 2022-12-05

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Clinical data
Other namesD-0120
Identifiers
IUPAC name
CAS Number1877347-38-0
PubChem CID118902135
ChemSpider128992995
UNIIAYFFM7L5F0
Chemical and physical data
FormulaC18H16N2O2S
Molar mass324.40 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  Kaufmann D, Chaiyakunapruk N, Schlesinger N (November 2024). “Optimizing gout treatment: A comprehensive review of current and emerging uricosurics”. Joint Bone Spine92 (2) 105826. doi:10.1016/j.jbspin.2024.105826PMID 39622367.
  2.  “Darbinurad”PatSnap.

/////////Darbinurad

Crelosidenib


Crelosidenib

CAS 2230263-60-0

7-{[(1S)-1-(4-{(1S)-1-[4-(prop-2-enoyl)piperazin-1-yl]-2-cyclopropylethyl}phenyl)ethyl]amino}-1-ethyl-1,4-dihydro-2Hpyrimido[4,5-d][1,3]oxazin-2-one
isocitrate dehydrogenase 1 (IDH1) inhibitor, antineoplastic

MF C28H36N6O3 MW 504.6 g/mol

  • LY3410738
  • 7-[[(1S)-1-[4-[(1S)-2-cyclopropyl-1-(4-prop-2-enoylpiperazin-1-yl)ethyl]phenyl]ethyl]amino]-1-ethyl-4H-pyrimido[4,5-d][1,3]oxazin-2-one
  • 7-(((1S)-1-(4-((1S)-2-cyclopropyl-1-(4-prop-2-enoylpiperazin-1-yl)ethyl)phenyl)ethyl)amino)-1-ethyl-4H-pyrimido(4,5-d)(1,3)oxazin-2-one

Crelosidenib is an investigational new drug that is being evaluated for the treatment of cancer. It acts as a selective inhibitor of isocitrate dehydrogenase 1 (IDH1), an enzyme that plays a crucial role in cellular metabolism and is frequently mutated in various cancers, including cholangiocarcinoma.[1][2]

Crelosidenib is an orally available inhibitor of mutant form of the isocitrate dehydrogenase type 1 (IDH1; IDH-1; IDH1 [NADP+] soluble), including the substitution mutation at arginine (R) in position 132, IDH1(R132), with potential antineoplastic activity. Upon oral administration, crelosidenib specifically and covalently binds to and modifies a single cysteine (Cys269) in the allosteric binding pocket of mutant forms of IDH1, thereby inactivating IDH1. This inhibits the formation of the oncometabolite 2-hydroxyglutarate (2HG) from alpha-ketoglutarate (a-KG). This depletes 2-HG levels, prevents 2HG-mediated signaling and leads to both an induction of cellular differentiation and an inhibition of cellular proliferation in tumor cells expressing mutant forms of IDH1. In addition, crelosidenib has the ability to cross the blood-brain barrier (BBB). IDH1 mutations, including IDH1(R132) mutations, are highly expressed in certain malignancies, including gliomas; they initiate and drive cancer growth by both blocking cell differentiation and catalyzing the formation of 2HG.

Syn

example 2 [US11001596B2]

https://patentscope.wipo.int/search/en/detail.jsf?docId=US289829390&_cid=P12-MG4UBU-88518-1

PAT

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Clinical data
Other namesLY3410738
Identifiers
IUPAC name
CAS Number2230263-60-0
PubChem CID135125140
IUPHAR/BPS12340
ChemSpider115009279
UNIIA4DU555RMD
KEGGD12708
Chemical and physical data
FormulaC28H36N6O3
Molar mass504.635 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  Zarei M, Hue JJ, Hajihassani O, Graor HJ, Katayama ES, Loftus AW, et al. (February 2022). “Clinical development of IDH1 inhibitors for cancer therapy”. Cancer Treatment Reviews103 102334. doi:10.1016/j.ctrv.2021.102334PMID 34974243.
  2.  Demir T, Moloney C, Mahalingam D (July 2024). “Emerging targeted therapies and strategies to overcome resistance in biliary tract cancers”. Critical Reviews in Oncology/Hematology199 104388. doi:10.1016/j.critrevonc.2024.104388PMID 38754771.

.///////////Crelosidenib, Antineoplastic, cholangiocarcinoma, LY3410738, LY 3410738

Camibirstat


Camibirstat

CAS 2671128-05-3

N-{(2S)-1-[(4-{6-[(2R,6S)-2,6-dimethylmorpholin-4-yl]pyridin-2-yl}-1,3-thiazol-2-yl)amino]-3-methoxy-1-oxopropan-2-yl}-1-(methanesulfonyl)-1H-pyrrole-3-carboxamide
ATPase inhibitor, antineoplastic

MW C24H30N6O6S2 MF 562.7 g/mol

  • 1H-Pyrrole-3-carboxamide, N-((1S)-2-((4-(6-((2R,6S)-2,6-dimethyl-4-morpholinyl)-2-pyridinyl)-2-thiazolyl)amino)-1-(methoxymethyl)-2-oxoethyl)-1-(methylsulfonyl)-
  • N-[(2S)-1-[[4-[6-[(2S,6R)-2,6-dimethylmorpholin-4-yl]pyridin-2-yl]-1,3-thiazol-2-yl]amino]-3-methoxy-1-oxopropan-2-yl]-1-methylsulfonylpyrrole-3-carboxamide
  • FHD 286

Camibirstat is an investigational new drug that is being evaluated for the treatment of cancer. It is a small molecule that acts as a selective inhibitor of SMARCA2 and SMARCA4, which are key components of the SWI/SNF chromatin remodeling complex.[1]

It is being developed by Foghorn Therapeutics.[2]

Camibirstat is an orally bioavailable, allosteric, small molecule inhibitor of transcription activator BRG1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4; SMARCA4) and BRM (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2; SMARCA2), with potential antineoplastic activity. Upon oral administration, camibirstat targets, binds to, and inhibits the activity of BRG1 and/or BRM, the primary ATPase components and mutually exclusive subunits of the BRG1/BRM-associated factor (BAF) complexes. This may lead to the inhibition of the SWI/SNF chromatin remodeling complex, disrupt chromatin remodeling and gene expression, and result in the downregulation of oncogenic pathways and the inhibition of tumor cell proliferation. BAF is an important regulator of transcriptional programs and gene expression. Mutations in BAF or its transcription factor partners are found in certain diseases including cancers.

PAT

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=US331910582&_cid=P11-MG1TKU-39131-1

Example 1. Preparation of N—((S)-1-((4-(6-(cis-2,6-dimethylmorpholino)pyridin-2-yl)thiazol-2-yl)amino)-3-methoxy-1-oxopropan-2-yl)-1-(methylsulfonyl)-1H-pyrrole-3-carboxamide

      N—((S)-1-((4-(6-(cis-2,6-dimethylmorpholino)pyridin-2-yl)thiazol-2-yl)amino)-3-methoxy-1-oxopropan-2-yl)-1-(methylsulfonyl)-1H-pyrrole-3-carboxamide was synthesized as shown in Scheme 1 below.

Step 7: Preparation of N—((S)-1-((4-(6-(cis-2,6-dimethylmorpholino)pyridin-2-yl)thiazol-2-yl)amino)-3-methoxy-1-oxopropan-2-O-1-(methylsulfonyl)-1H-pyrrole-3-carboxamide

   To a solution of 1-methylsulfonylpyrrole-3-carboxylic acid (Intermediate K) (2.43 g, 12.9 mmol), EDCI (2.69 g, 14.0 mmol), HOBt (1.89 g, 14.0 mmol), and DIPEA (10.2 mL, 58.4 mmol) in dichloromethane (50 mL) was added Intermediate J (5.00 g, 11.7 mmol). After stirring at room temperature for 4 h, the reaction mixture was concentrated under reduced pressure. The residue was diluted with water and extracted three times with ethyl acetate. The combined organic layers were washed three times with saturated aqueous NH 4Cl, once with brine, dried over Na 2SO 4, filtered, and concentrated under reduced pressure to give a residue. The residue was purified by silica gel column chromatography (petroleum ether:ethyl acetate=1:1 to 1:2). The residue was triturated with methyl tert-butyl ether. After 0.5 h, the suspension was filtered, the filter cake was washed with methyl tert-butyl ether, and dried in vacuo. The solid was dissolved in dimethyl sulfoxide (12 mL) and added dropwise to water (800 mL). The suspension was filtered to give wet filter cake. The filter cake was suspended in water and stirred at room temperature. After 1 hour, the solid was collected by filtration, washed three times with water and dried in vacuo to give N—((S)-1-((4-(6-(cis-2,6-dimethylmorpholino)pyridin-2-yl)thiazol-2-yl)amino)-3-methoxy-1-oxopropan-2-yl)-1-(methylsulfonyl)-1H-pyrrole-3-carboxamide (3.9 g, 6.93 mmol, 59.3% yield) as a white solid.
      LCMS (ESI) m/z: [M+H] +=563.1.
       1H NMR (400 MHz, DMSO-d6) δ 12.49 (br s, 1H), 8.51 (d, J=7.2 Hz, 1H), 7.98-7.97 (m, 1H), 7.78 (s, 1H), 7.67-7.57 (m, 1H), 7.29-7.27 (m, 1H), 7.26 (d, J=7.2 Hz, 1H), 6.88-6.74 (m, 2H), 4.94-4.91 (m, 1H), 4.25 (d, J=11.6 Hz, 2H), 3.77-3.67 (m, 2H), 3.63-3.62 (m, 2H), 3.57 (s, 3H), 3.31 (s, 3H), 2.44-2.38 (m, 2H), 1.18 (d, J=6.0 Hz, 6H).

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Clinical data
Other namesFHD286
Identifiers
IUPAC name
CAS Number2671128-05-3
PubChem CID156818030
ChemSpider115010237
UNIIQHA5XLA4SA
ChEMBLChEMBL5095181
Chemical and physical data
FormulaC24H30N6O6S2
Molar mass562.66 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  Yu L, Wu D (July 2024). “SMARCA2 and SMARCA4 Participate in DNA Damage Repair”Frontiers in Bioscience (Landmark Edition)29 (7): 262. doi:10.31083/j.fbl2907262PMID 39082357.
  2.  “Camibirstat”PatSnap.

/////////////Camibirstat, ATPase inhibitor, antineoplastic, Foghorn Therapeutics, FHD 286

Brimarafenib


Brimarafenib

CAS 1643326-82-2

MF C24H17F3N4O4 MW482.4 g/mol

N-{(1S,1aS,6bS)-5-[(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-4-yl)oxy]-1a,6b-dihydro-1H-cyclopropa[b]benzofuran-1-yl}-N′-(2,4,5-trifluorophenyl)urea
rapidly accelerated fibrosarcoma (Raf) kinase inhibitor,

  • 1-((1S,1aS,6bS)-5-((7-oxo-6,8-dihydro-5H-1,8-naphthyridin-4-yl)oxy)-1a,6b-dihydro-1H-cyclopropa(b)(1)benzofuran-1-yl)-3-(2,4,5-trifluorophenyl)urea
  • 1-[(1S,1aS,6bS)-5-[(7-oxo-6,8-dihydro-5H-1,8-naphthyridin-4-yl)oxy]-1a,6b-dihydro-1H-cyclopropa[b][1]benzofuran-1-yl]-3-(2,4,5-trifluorophenyl)urea

Antineoplastic, MapKure, LLC, SpringWorks Therapeutics, BeiGene, BGB-3245, BGB 3245, GXS33OY2CB

Brimarafenib is an investigational new drug that is being evaluated for the treatment of cancer. It targets the proto-oncogene BRAF with activating mutations BRAF mutations (such as V600E), non-V600 BRAF mutations, and RAF fusions.[1][2]

It is being developed by MapKure, LLC, a joint venture between SpringWorks Therapeutics and BeiGene.[1]

Brimarafenib is an orally available inhibitor of both monomer and dimer forms of activating mutations of the serine/threonine-protein kinase BRAF (B-raf) protein, including V600 BRAF mutations, non-V600 BRAF mutations, and RAF fusions, with potential antineoplastic activity. Upon administration, brimarafenib targets and binds to both monomeric and dimeric forms of activating BRAF mutations and fusions. This may result in the inhibition of BRAF-mediated signaling and inhibit proliferation in tumor cells expressing BRAF mutations and fusions. BRAF belongs to the RAF family of serine/threonine protein kinases and plays a role in regulating the mitogen-activated protein kinase (MAPK)/ extracellular signal-regulated kinase (ERK) signaling pathway, which is often dysregulated in human cancers and plays a key role in tumor cell proliferation and survival. BRAF mutations and fusions have been identified in a number of solid tumors and are drivers of cancer growth.

PAT

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=WO2014206343&_cid=P22-MG0802-32937-1

PAT

Fused tricyclic urea compounds as raf kinase and/or raf kinase dimer inhibitors

Publication Number: WO-2014206343-A1

Priority Date: 2013-06-28

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Clinical data
Other namesBGB-3245
Identifiers
IUPAC name
CAS Number1643326-82-2
PubChem CID117807031
IUPHAR/BPS13203
ChemSpider129144353
UNIIGXS33OY2CB
Chemical and physical data
FormulaC24H17F3N4O4
Molar mass482.419 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  “Brimarafenib”.
  2.  Tellenbach FL, Seiler LL, Johnson M, Rehrauer H, Schukla P, Martinez-Gomez J, et al. “Combination of the Novel Raf Dimer Inhibitor Brimarafenib with the Mek Inhibitor Mirdametinib is Effective Against Nras Mutant Melanoma”SSRN: 4934723. doi:10.2139/ssrn.4934723.

///////Brimarafenib, Antineoplastic, MapKure, LLC, SpringWorks Therapeutics, BeiGene, BGB-3245, BGB 3245, GXS33OY2CB

Brezivaptan


Brezivaptan

CAS 1370444-22-6

ANC-501THY-1773TS-121, 575OB1CKN0

MF C25H30ClN5O3 MW 484.0 g/mol

2-[3-(3-chlorophenyl)-1-{4-[2-(morpholin-4-yl)ethyl]phenyl}-5-oxo-1,5-dihydro-4H-1,2,4-triazol-4-yl]-N-(propan-2-yl)acetamide

2-[3-(3-chlorophenyl)-1-[4-(2-morpholin-4-ylethyl)phenyl]-5-oxo-1,2,4-triazol-4-yl]-N-propan-2-ylacetamide
vasopressin receptor antagonist

  • ANC-501 in the Treatment of Adults With Major Depressive DisorderCTID: NCT05439603Phase: Phase 2Status: CompletedDate: 2024-12-31
  • A Study to Evaluate the Safety and Efficacy of TS-121 as an Adjunctive Treatment for Major Depressive DisorderCTID: NCT03093025Phase: Phase 2Status: TerminatedDate: 2020-07-14
  • Exploratory Study Using Positron Emission Tomography With TS-121 and [11C]TASP0410699 in Healthy Adult Male SubjectsCTID: NCT02448212Phase: Phase 1Status: CompletedDate: 2017-02-14

Brezivaptan[1] (developmental code names ANC-501THY-1773TS-121) is an orally activeselective vasopressin V1B receptor antagonist which is under development by Taisho Pharmaceutical for the adjunctive treatment of major depressive disorder.[2][3][4] As of November 2022, it is in phase II clinical trials for this indication.[2][3][5]

ANC-501 is under investigation in clinical trial NCT05439603 (ANC-501 in the Treatment of Adults With Major Depressive Disorder).

SYN

https://patentscope.wipo.int/search/en/detail.jsf?docId=US90328697&_cid=P11-MFYT6K-98384-1

Synthesis of Example Aa-1

2-[3-(3-Chlorophenyl)-1-{4-[2-(morpholin-4-yl)ethyl]phenyl}-5-oxo-1,5-dihydro-4H-1,2,4-triazol-4-yl]-N-(propan-2-yl)acetamide

A mixture of the compound (100 mg) prepared in Reference Example P-I1, morpholine (0.03 mL), N,N-diisopropylethylamine (0.35 mL), and MeCN (3.00 mL) was stirred at an outside temperature of 80° C. overnight. After cooling, the solvent was distilled off under reduced pressure. The residue was purified by column chromatography (SNAP Cartridge HP-Sil: 10 g, mobile phase: CHCl 3/MeOH=98/2 to 85/15 (v/v); and SNAP Cartridge KP-NH: 28 g, mobile phase: n-hexane/CHCl 3=80/20 to 0/100 (v/v)) and preparative thin-layer chromatography (PTLC) (1.0 mm silica gel 60F 254 plate, mobile phase: EtOAc/MeOH=95/5 (v/v)). The resulting crude product was washed with a solvent mixture of EtOAc and n-hexane (EtOAc/n-hexane=1/4 (v/v)) with stirring to yield the title compound (70 mg, colorless solid).
      MS (ESI pos.) m/z: 484 ([M+H] +).
       1H-NMR (600 MHz, CDCl 3)δ(ppm); 1.20 (6H, d, J=6.4 Hz), 2.48-2.67 (6H, m), 2.80-2.88 (2H, m), 3.76 (4H, br. s.), 4.06-4.13 (1H, m), 4.36 (2H, s), 6.37-6.45 (1H, m), 7.31 (2H, d, J=8.3 Hz), 7.46-7.50 (1H, m), 7.51-7.55 (1H, m), 7.74-7.77 (1H, m), 7.85-7.88 (1H, m), 7.94 (2H, d, J=8.7 Hz).

PAT

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References

  1.  PubChem. “Brezivaptan”pubchem.ncbi.nlm.nih.gov. Retrieved 2024-08-15.
  2.  “TS 121 -“AdisInsight. Springer Nature Switzerland AG.
  3.  “New Drug Pipeline – Taisho Pharmaceutical Holdings”.
  4.  Kamiya M, Sabia HD, Marella J, Fava M, Nemeroff CB, Umeuchi H, Iijima M, Chaki S, Nishino I (September 2020). “Efficacy and safety of TS-121, a novel vasopressin V1B receptor antagonist, as adjunctive treatment for patients with major depressive disorder: A randomized, double-blind, placebo-controlled study”Journal of Psychiatric Research128: 43–51. doi:10.1016/j.jpsychires.2020.05.017PMID 32521250S2CID 219587135.
  5.  Inatani S, Mizuno-Yasuhira A, Kamiya M, Nishino I, Sabia HD, Endo H (May 2021). “Prediction of a clinically effective dose of THY1773, a novel V1B receptor antagonist, based on preclinical data”Biopharmaceutics & Drug Disposition42 (5): 204–217. doi:10.1002/bdd.2273PMC 8252455PMID 33734452.
  • Clinical trial number NCT03093025 for “A Study to Evaluate the Safety and Efficacy of TS-121 as an Adjunctive Treatment for Major Depressive Disorder” at ClinicalTrials.gov
Clinical data
Other namesTS-121; TS121; TS-1211; TS1211; THY1773; THY-1773; ANC-501; ANC501
Routes of
administration
By mouth
Identifiers
IUPAC name
CAS Number1370444-22-6
PubChem CID56952080
DrugBankDB18907
ChemSpider129325033
UNII575OB1CKN0
ChEMBLChEMBL5314910
Chemical and physical data
FormulaC25H30ClN5O3
Molar mass484.00 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

////////////Brezivaptan, ANC-501THY-1773TS-121, ANC 501THY 1773TS 121, 575OB1CKN0

Ateganosine


Ateganosine

CAS 789-61-7

MF C10H13N5O3S MW 283.31 g/mol

2′-deoxy-6-thioguanosine
nucleoside analogue, antineoplastic

  • 6-THIO-2′-DEOXYGUANOSINE
  • 2′-Deoxythioguanosine
  • TGdR
  • Thioguanine deoxyriboside
  • KR0RFB46DF
  • NSC-71261

Ateganosine is a telomerase inhibitor[1] and apoptosis inducer currently under investigation for the treatment of various cancers, including non-small cell lung cancer (NSCLC).[2]

Beta-Thioguanine Deoxyriboside is a thiopurine nucleoside derivative with antineoplastic activity. After conversion to the triphosphate, beta-thioguanine deoxyriboside is incorporated into DNA, resulting in inhibition of DNA replication. This agent is cytotoxic against leukemia cell lines and has demonstrated some activity against leukemia cells in vivo. Beta-thioguanine deoxyriboside demonstrates antineoplastic activity against 6-thioguanine-resistant tumor cells. (NCI04)

  • THIO Sequenced With Cemiplimab in Advanced NSCLCCTID: NCT05208944Phase: Phase 2Status: RecruitingDate: 2025-05-31
  • A Phase III Study With THIO + Cemiplimab vs Chemotherapy as 3rd Line Treatment in Advanced/Metastatic NSCLCCTID: NCT06908304Phase: Phase 3Status: Not yet recruitingDate: 2025-04-08

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References

  1.  Eglenen-Polat B, Kowash RR, Huang HC, Siteni S, Zhu M, Chen K, et al. (January 2024). “A telomere-targeting drug depletes cancer initiating cells and promotes anti-tumor immunity in small cell lung cancer”Nature Communications15 (1) 672. Bibcode:2024NatCo..15..672Edoi:10.1038/s41467-024-44861-8PMC 10803750PMID 38253555.
  2.  “Ateganosine”PatSnap.
Clinical data
Other names2′-Deoxythioguanosine
Identifiers
IUPAC name
CAS Number789-61-7
PubChem CID3000603
DrugBankDB18117
ChemSpider2272164
UNIIKR0RFB46DF
KEGGD13071
ChEMBLChEMBL3250476
CompTox Dashboard (EPA)DTXSID4021345 
Chemical and physical data
FormulaC10H13N5O3S
Molar mass283.31 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

////////Ateganosine, nucleoside analogue, antineoplastic, 6-THIO-2′-DEOXYGUANOSINE, 2′-Deoxythioguanosine, TGdR, Thioguanine deoxyriboside, KR0RFB46DF, fast track designation, NSC-71261, NSC 71261

Bimokalner


Bimokalner

CAS 2243284-19-5

MF C15H18F5NOS MW 355.4 g/mol

  • KEY5KKX6QY
  • orb2663976
  • (1S,2S,4R)-N-[[3-(pentafluoro-λ6-sulfanyl)phenyl]methyl]bicyclo[2.2.1]heptane-2-carboxamide

(1S,2S,4R)-N-{[3-(pentafluoro-λ6sulfanyl)phenyl]methyl} bicyclo[2.2.1]heptane-2-carboxamide
voltage-gated potassium channel (Kv7.4) agonist

Bimokalner is an investigational new drug under evaluation for preventing and treating hearing loss caused by cisplatin treatment. It is a voltage-gated potassium channel agonist targeting Kv7.4 and is being developed by Acousia Therapeutics GmbH.[1][2]

PAT

Compounds useful as potassium channel openers, Publication Number: US-11884642-B2, Priority Date: 2017-02-28, Grant Date: 2024-01-30

PAT

(1R,2R,4S)-rel-N-(3-(pentafluorosulfanyl)benzyl)bicyclo[2.2.1]heptane-2-carboxamide

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References

  1.  “Bimokalner”PatSnap.
  2.  Tavanai E, Rahimi V, Khalili ME, Falahzadeh S, Motasaddi Zarandy M, Mohammadkhani G (2024). “Age-related hearing loss: An updated and comprehensive review of the interventions”Iranian Journal of Basic Medical Sciences27 (3): 256–269. doi:10.22038/IJBMS.2023.72863.15849PMC 10849199PMID 38333758.
Clinical data
Other namesACOU085
Identifiers
IUPAC name
CAS Number2243284-19-5
PubChem CID135309173
UNIIKEY5KKX6QY
Chemical and physical data
FormulaC15H18F5NOS
Molar mass355.37 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

///////////Bimokalner, Acousia Therapeutics, KEY5KKX6QY, orb 2663976