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DR ANTHONY MELVIN CRASTO Ph.D

DR ANTHONY MELVIN CRASTO Ph.D

DR ANTHONY MELVIN CRASTO, Born in Mumbai in 1964 and graduated from Mumbai University, Completed his Ph.D from ICT, 1991,Matunga, Mumbai, India, in Organic Chemistry, The thesis topic was Synthesis of Novel Pyrethroid Analogues, Currently he is working with AFRICURE PHARMA, ROW2TECH, NIPER-G, Department of Pharmaceuticals, Ministry of Chemicals and Fertilizers, Govt. of India as ADVISOR, earlier assignment was with GLENMARK LIFE SCIENCES LTD, as CONSUlTANT, Retired from GLENMARK in Jan2022 Research Centre as Principal Scientist, Process Research (bulk actives) at Mahape, Navi Mumbai, India. Total Industry exp 32 plus yrs, Prior to joining Glenmark, he has worked with major multinationals like Hoechst Marion Roussel, now Sanofi, Searle India Ltd, now RPG lifesciences, etc. He has worked with notable scientists like Dr K Nagarajan, Dr Ralph Stapel, Prof S Seshadri, etc, He did custom synthesis for major multinationals in his career like BASF, Novartis, Sanofi, etc., He has worked in Discovery, Natural products, Bulk drugs, Generics, Intermediates, Fine chemicals, Neutraceuticals, GMP, Scaleups, etc, he is now helping millions, has 9 million plus hits on Google on all Organic chemistry websites. His friends call him Open superstar worlddrugtracker. His New Drug Approvals, Green Chemistry International, All about drugs, Eurekamoments, Organic spectroscopy international, etc in organic chemistry are some most read blogs He has hands on experience in initiation and developing novel routes for drug molecules and implementation them on commercial scale over a 32 PLUS year tenure till date Feb 2023, Around 35 plus products in his career. He has good knowledge of IPM, GMP, Regulatory aspects, he has several International patents published worldwide . He has good proficiency in Technology transfer, Spectroscopy, Stereochemistry, Synthesis, Polymorphism etc., He suffered a paralytic stroke/ Acute Transverse mylitis in Dec 2007 and is 90 %Paralysed, He is bound to a wheelchair, this seems to have injected feul in him to help chemists all around the world, he is more active than before and is pushing boundaries, He has 100 million plus hits on Google, 2.5 lakh plus connections on all networking sites, 100 Lakh plus views on dozen plus blogs, 227 countries, 7 continents, He makes himself available to all, contact him on +91 9323115463, email amcrasto@gmail.com, Twitter, @amcrasto , He lives and will die for his family, 90% paralysis cannot kill his soul., Notably he has 38 lakh plus views on New Drug Approvals Blog in 227 countries......https://newdrugapprovals.wordpress.com/ , He appreciates the help he gets from one and all, Friends, Family, Glenmark, Readers, Wellwishers, Doctors, Drug authorities, His Contacts, Physiotherapist, etc He has total of 32 International and Indian awards

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Veonetinib


Veonetinib

👉CAS 1210828-09-3

MF C27H28FN3O4 MW 477.5 g/mol

5-[2-[4-[(4-fluoro-2-methyl-1H-indol-5-yl)oxy]-6-methoxyquinolin-7-yl]oxyethyl]-5-azaspiro[2.4]heptan-7-ol

5-AZASPIRO(2.4)HEPTAN-7-OL, 5-(2-((4-((4-FLUORO-2-METHYL-1H-INDOL-5-YL)OXY)-6-METHOXY-7-QUINOLINYL)OXY)ETHYL)-

5-(2-(4-(4-fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxyquinolin-7-yloxy)ethyl)-5-azaspiro[2.4]-heptan-7-ol

(7RS)-5-[2-({4-[(4-fluoro-2-methyl-1H-indol-5-yl)oxy]-6-methoxyquinolin7-yl}oxy)ethyl]-5-azaspiro[2.4]heptan-7-ol
tyrosine kinase inhibitor, antineoplastic, U7PA8S6XGJ

👉SYN

[WO2010021918]

Example 3

5-(2-(4-(4-fluoro-2-methyl-lH-indol-5-yloxy)-6-methoxyquinolin-7-yloxy)ethyl)-5-azaspiro[2.4]-heptan-7-ol

The above product from Example 2 (75 mg) was dissolved into MeOH (8 ml) and stirred at RT.

NaBH4 (75 mg) was added to the reaction and stirred at RT for 30 min. The reaction was evaporated and purified by column chromatography to give title compound (60 mg). Mass: (M + 1), 478

Patent Scope

  • Covers:
    • Quinoline–indole kinase inhibitors
    • VEGFR / angiogenesis targets
    • Broad Markush structures

Fragment A: Indole Phenol

4-fluoro-2-methyl-1H-indol-5-ol

Typical Preparation

  1. Fischer indole synthesis or substituted aniline cyclization
  2. Fluorination / directed substitution
  3. Hydroxyl introduction at C-5

Fragment B: Quinoline Electrophile

4-chloro-6-methoxy-7-(leaving group) quinoline

Typical Route

  1. Start from 6-methoxyaniline
  2. Skraup / Doebner–Miller → quinoline core
  3. Chlorination at C-4
  4. Functionalization at C-7 (OH or halide)

Fragment C: Chiral Spiro Amine

(R)-5-azaspiro[2.4]heptan-7-ol

  • Usually from:
    • Chiral pool OR
    • Resolution of racemate
  • Important: defines final stereochemistry

4. STEP-BY-STEP SYNTHESIS (PATENT-ALIGNED)

Step 1: Indole–Quinoline Ether Formation

Reaction: SNAr / Ullmann-type coupling

Indole phenol + 4-chloroquinoline → aryl ether

Conditions

  • Base: K2CO3 / Cs2CO3
  • Solvent: DMF / DMSO
  • Temp: 80–120°C

Forms:
Indole–O–quinoline core


Step 2: Introduction of Linker (C-7 substitution)

If quinoline has OH:

Quinoline–OH + Br–CH2–CH2–X → O–CH2CH2–X

If halide:Direct alkylation

Conditions

  • Base: NaH / K2CO3
  • Solvent: DMF
  • Temp: 50–90°C

Product:
Quinoline–O–CH2CH2–X


Step 3: Coupling with Spiro Amine

Quinoline–O–CH2CH2–X + spiro amine → final amine linkage

Reaction Type

  • SN2 substitution

Conditions

  • Base: DIPEA / Et3N
  • Solvent: ACN / DMF
  • Temp: 50–80°C

Step 4: Final Deprotection / Purification

  • Remove protecting groups (if any)
  • Chiral purity control
  • Crystallization

Step 1: Preparation of Indole–Quinoline Ether

Starting materials:

  • 4-fluoro-2-methyl-1H-indol-5-ol
    1.00 equiv (e.g., 5.0 g, ~30 mmol)
  • 4-chloro-6-methoxyquinoline
    1.10 equiv (~33 mmol)

Reagents:

  • Potassium carbonate (K₂CO₃) → 2.0 equiv (~60 mmol)
  • Solvent: DMF (50–60 mL)

Procedure:

  1. Charge indole phenol and K₂CO₃ in DMF under nitrogen.
  2. Add 4-chloroquinoline portionwise.
  3. Heat to 100–110°C.
  4. Stir for 8–12 h.

Workup:

  • Cool to RT
  • Pour into water (200 mL)
  • Extract with EtOAc (3×)
  • Wash with brine, dry (Na₂SO₄)
  • Concentrate

Purification:

  • Silica gel chromatography (EtOAc/hexane)

Yield: ~70–80%
Product: Indole–quinoline ether intermediate


Step 2: Installation of Ethylene Linker

Starting material: Step 1 product (~25 mmol)

Reagents:

  • 1,2-dibromoethane → 1.5–2.0 equiv
  • Base: K₂CO₃ → 2 equiv
  • Solvent: DMF (40 mL)

Procedure:

  1. Dissolve intermediate in DMF
  2. Add K₂CO₃
  3. Add dibromoethane
  4. Heat to 80–90°C for 6–8 h

Workup:

  • Pour into water
  • Extract with EtOAc
  • Dry and concentrate

Product: Quinoline–O–CH₂CH₂–Br

Yield: ~65–75%


Step 3: Coupling with Chiral Spiro Amine

Starting materials:

  • Bromo intermediate → 1.0 equiv (~15–20 mmol)
  • (R)-5-azaspiro[2.4]heptan-7-ol → 1.2 equiv

Reagents:

  • DIPEA or Et₃N → 2 equiv
  • Solvent: Acetonitrile or DMF (30–40 mL)

Procedure:

  1. Combine bromo intermediate and amine in solvent
  2. Add DIPEA
  3. Heat to 60–70°C
  4. Stir 12–16 h

Workup:

  • Remove solvent
  • Dissolve in EtOAc
  • Wash with water + brine
  • Dry and concentrate

Yield: ~70–85%


Step 4: Final Purification

Purification options:

  • Silica chromatography OR
  • Recrystallization (EtOAc/hexane or IPA)

Optional:

  • Convert to pharmaceutically acceptable salt

Final Yield (overall): ~35–45%

PAT

EXAMPLE 1

4-(4-Fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxy-7-[2-(5,8-Dioxa-10-azadispiro[2.0.4.3]-undecane)ethoxy]quinoline

Preparation of 4-(4-fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxy-7-benzyloxyquinoline

Method A:

      4-Chloro-7-benzyloxy-6-methoxy-quinoline (WO2008112407, 1.5 g) was mixed with DMAP (1.5 eq), 2-methyl-4-fluoro-5-hydroxyindole (WO0047212) (1 eq) in dioxane (20 ml). The reaction was refluxed for three days and diluted with EtOAc, water and extracted with EtOAc three times. The combined organic layer was washed with water, brine and dried. The solution was evaporated and purified with silica gel column to give 4-(4-fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxy-7-benzyloxyquinoline (600 mg).

Method B:

      4-Chloro-7-benzyloxy-6-methoxy-quinoline (WO2008112407, 1.5 g) was mixed with 3-(2,2-dimethoxypropyl)-2-fluoro-4-nitrophenol (WO0047212) (1.5 eq) in dioxane (30 ml). The reaction was refluxed for three days and diluted with EtOAc, water and extracted with EtOAc three times. The combined organic layer was washed with water, brine and dried. The solution was evaporated and purified with silica gel column to give 7-(benzyloxy)-4-(3-(2,2-dimethoxypropyl)-2-fluoro-4-nitrophenoxy)-6-methoxyquinoline (650 mg). This product was mixed with 2NHCl (3 ml) and acetone (30 ml) and refluxed for 6 hours. The reaction was diluted with EtOAc and neutralized with saturated NaHCO 3, further extracted with EtOAc three times. The combined organic layer was washed with water, brine and dried. The solution was evaporated and purified with silica gel column to give 1-(3-(7-(benzyloxy)-6-methoxyquinolin-4-yloxy)-2-fluoro-6-nitrophenyl)propan-2-one (500 mg) which was mixed with iron (500 mg) and NH 4Cl (50 mg) in EtOH/H 2O (20 ml, 4/1). The reaction was refluxed for 4 hours, filter through Celite and evaporated. The residue was extracted with EtOAc three times. The combined organic layer was washed with water, brine and dried. The solution was evaporated and purified with silica gel column to give 4-(4-fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxy-7-benzyloxyquinoline (250 mg).
      4-(4-Fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxy-7-benzyloxyquinoline (600 mg) was mixed with HCONH (600 mg) and Pd/C (10%, 100 mg) followed by refluxing 30 min. The reaction was filtered while it was hot and the filtrate was evaporated and washed with water followed by filtration to give 4-(4-fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxy-7-hydroxyquinoline (400 mg).

Preparation of Title Compound

Method C:

      4-(4-Fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxy-7-hydroxyquinoline (400 mg) was mixed with 1,2-dibromoethane (2 eq) and K 2CO (2 eq) in DMF (5 ml). The reaction was heated at 100° C. for 5 hours and diluted with EtOAc, water and extracted with EtOAc three times. The combined organic layer was washed with water, brine and dried. The solution was evaporated and purified with silica gel column. The product was mixed with NaI (250 mg) in acetonitrile (15 ml) and refluxed for 30 min. The reaction was cooled, DIPEA (500 μL) and 5,8-Dioxa-10-azadispiro[2.0.4.3]-undecane (300 mg) were added into the reaction which was refluxed overnight. The reaction was diluted with EtOAc, water and extracted with EtOAc three times. The combined organic layer was washed with water, brine and dried. The solution was evaporated and purified with silica gel column to give title compound (150 mg). Mass: (M+1), 520

Method D:

      4-(4-Fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxy-7-hydroxyquinoline (400 mg) was mixed with 2-bromo-1,1-dimethoxyethane (2 eq) and K 2CO (2 eq) in DMF (5 ml). The reaction was heated at 100° C. for 8 hours and diluted with EtOAc, water and extracted with EtOAc three times. The combined organic layer was washed with water, brine and dried. The solution was evaporated and purified with silica gel column. The product was mixed with 1NHCl (2 ml) in EtOH (10 ml) and refluxed for 5 hours. The reaction was evaporated and neutralized with saturated NaHCO 3, further extracted with EtOAc three times. The combined organic layer was washed with water, brine and dried. The solution was evaporated and purified with silica gel column to give the aldehye adduct (400 mg) which was mixed with 5,8-Dioxa-10-azadispiro[2.0.4.3]-undecane (200 mg) with NaBH(OAc)3 (2 eg) in DCM (10 ml). The reaction was stirred at RT for 2 hours then diluted with EtOAc, water and extracted with EtOAc three times. The combined organic layer was washed with water, brine and dried. The solution was evaporated and purified with silica gel column give title compound (250 mg). Mass: (M+1), 520,

EXAMPLE 2

5-(2-(4-(4-Fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxyquinolin-7-yloxy)ethyl)-5-azaspiro[2.4]-heptan-7-one

      The above product from Example 1 (100 mg) was mixed with 1N HCl (4 ml) and acetone (20 ml). The reaction was refluxed overnight and evaporated. The solution was basified with 2N NaOH and extracted with EtOAc. The combined organic layer was washed with H 2O followed by brine, dried over Na 2SO and evaporated. The residue was purified by column chromatography to give title compound (75 mg). Mass: (M+1), 476

EXAMPLE 3

5-(2-(4-(4-fluoro-2-methyl-1H-indol-5-yloxy)-6-methoxyquinolin-7-yloxy)ethyl)-5-azaspiro[2.4]-heptan-7-ol

      The above product from Example 2 (75 mg) was dissolved into MeOH (8 ml) and stirred at RT. NaBH (75 mg) was added to the reaction and stirred at RT for 30 min. The reaction was evaporated and purified by column chromatography to give title compound (60 mg). Mass: (M+1), 478

PAT

PAT

CN201710900497.6 CN201610649732.2 → leads to US10689361B2

PAT

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REF

//////////veonetinib, ANAX LAB, tyrosine kinase inhibitor, antineoplastic, U7PA8S6XGJ