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ORGANIC SPECTROSCOPY

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DR ANTHONY MELVIN CRASTO Ph.D

DR ANTHONY MELVIN CRASTO Ph.D

DR ANTHONY MELVIN CRASTO, Born in Mumbai in 1964 and graduated from Mumbai University, Completed his Ph.D from ICT, 1991,Matunga, Mumbai, India, in Organic Chemistry, The thesis topic was Synthesis of Novel Pyrethroid Analogues, Currently he is working with AFRICURE PHARMA, ROW2TECH, NIPER-G, Department of Pharmaceuticals, Ministry of Chemicals and Fertilizers, Govt. of India as ADVISOR, earlier assignment was with GLENMARK LIFE SCIENCES LTD, as CONSUlTANT, Retired from GLENMARK in Jan2022 Research Centre as Principal Scientist, Process Research (bulk actives) at Mahape, Navi Mumbai, India. Total Industry exp 32 plus yrs, Prior to joining Glenmark, he has worked with major multinationals like Hoechst Marion Roussel, now Sanofi, Searle India Ltd, now RPG lifesciences, etc. He has worked with notable scientists like Dr K Nagarajan, Dr Ralph Stapel, Prof S Seshadri, etc, He did custom synthesis for major multinationals in his career like BASF, Novartis, Sanofi, etc., He has worked in Discovery, Natural products, Bulk drugs, Generics, Intermediates, Fine chemicals, Neutraceuticals, GMP, Scaleups, etc, he is now helping millions, has 9 million plus hits on Google on all Organic chemistry websites. His friends call him Open superstar worlddrugtracker. His New Drug Approvals, Green Chemistry International, All about drugs, Eurekamoments, Organic spectroscopy international, etc in organic chemistry are some most read blogs He has hands on experience in initiation and developing novel routes for drug molecules and implementation them on commercial scale over a 32 PLUS year tenure till date Feb 2023, Around 35 plus products in his career. He has good knowledge of IPM, GMP, Regulatory aspects, he has several International patents published worldwide . He has good proficiency in Technology transfer, Spectroscopy, Stereochemistry, Synthesis, Polymorphism etc., He suffered a paralytic stroke/ Acute Transverse mylitis in Dec 2007 and is 90 %Paralysed, He is bound to a wheelchair, this seems to have injected feul in him to help chemists all around the world, he is more active than before and is pushing boundaries, He has 100 million plus hits on Google, 2.5 lakh plus connections on all networking sites, 100 Lakh plus views on dozen plus blogs, 227 countries, 7 continents, He makes himself available to all, contact him on +91 9323115463, email amcrasto@gmail.com, Twitter, @amcrasto , He lives and will die for his family, 90% paralysis cannot kill his soul., Notably he has 38 lakh plus views on New Drug Approvals Blog in 227 countries......https://newdrugapprovals.wordpress.com/ , He appreciates the help he gets from one and all, Friends, Family, Glenmark, Readers, Wellwishers, Doctors, Drug authorities, His Contacts, Physiotherapist, etc He has total of 32 International and Indian awards

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Epsametostat

Epsametostat

CAS 2202678-06-4

MF C31H36F3N7O3 MW611.7 g/mol

N-[(4-methoxy-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl]-6-methyl-1-(6-methylpyridazin-3-yl)-5-{(1R)-1-[4-(2,2,2-trifluoroethyl)piperazin-1-yl]ethyl}indolizine-7-carboxamide

N-[(4-methoxy-6-methyl-2-oxo-1H-pyridin-3-yl)methyl]-6-methyl-1-(6-methylpyridazin-3-yl)-5-[(1R)-1-[4-(2,2,2-trifluoroethyl)piperazin-1-yl]ethyl]indolizine-7-carboxamide
histone N-methyltransferase inhibitor, antineoplastic, Shanghai Haihe Pharmaceutical, HH 2853, (R)-HH2853

Epsametostat is an investigational new drug that is being evaluated for the treatment of peripheral T-cell lymphoma. It is a EZH1/EZH2 inhibitor developed by Shanghai Haihe Pharmaceutical Research & Development Co., Ltd.[1][2][3]

PAT

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=WO2018045971&_cid=P22-MGK809-27208-1

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……

References

  1.  An R, Li YQ, Lin YL, Xu F, Li MM, Liu Z (February 2023). “EZH1/2 as targets for cancer therapy”. Cancer Gene Therapy30 (2): 221–235. doi:10.1038/s41417-022-00555-1PMID 36369341.
  2.  Wei L, Mei D, Hu S, Du S (August 2024). “Dual-target EZH2 inhibitor: latest advances in medicinal chemistry”Future Medicinal Chemistry16 (15): 1561–1582. doi:10.1080/17568919.2024.2380243PMC 11370917PMID 39082677.
  3.  “Epsametostat”PatSnap.
Clinical data
Other namesHH2853
Identifiers
IUPAC name
CAS Number2202678-06-4
PubChem CID134340937
ChemSpider115010245
UNIIP8U5JF6NBY
Chemical and physical data
FormulaC31H36F3N7O3
Molar mass611.670 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

//////////Epsametostat, histone N-methyltransferase inhibitor, antineoplastic, Shanghai Haihe Pharmaceutical, HH 2853, (R)-HH2853

Envudeucitinib

Envudeucitinib

CAS 2417135-66-9

MF C22H18[2]H6N6O3 MW426.5 g/mol

N-[4-{2-methoxy-3-[1-(2H3)methyl-1H-1,2,4-triazol-3-yl]anilino}-5-(3,3,3-2H3)propanoylpyridin-2-yl] cyclopropanecarboxamide

N-(4-(2-methoxy-3-(1-(trideuteriomethyl)-1,2,4-triazol-3-yl)anilino)-5-(3,3,3-trideuteriopropanoyl)pyridin-2-yl)cyclopropanecarboxamide

N-[4-[2-methoxy-3-[1-(trideuteriomethyl)-1,2,4-triazol-3-yl]anilino]-5-(3,3,3-trideuteriopropanoyl)pyridin-2-yl]cyclopropanecarboxamide
Janus kinase inhibitor, anti-inflammatory, Fronthera U.S. Pharmaceuticals, psoriasis, FTP 637

Envudeucitinib is an investigational new drug that is being evaluated for the treatment of psoriasis. It is a selective tyrosine kinase 2 (TYK2) inhibitor developed by Fronthera U.S. Pharmaceuticals LLC and now owned by Alumis, Inc. for the treatment of autoimmune diseases. Envudeucitinib targets the TYK2 signaling pathway, which plays a crucial role in regulating multiple pro-inflammatory cytokines such as IL-12IL-23, and type I interferons.[1][2]

PAT

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=WO2024081603&_cid=P11-MGGDZU-88200-1

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=WO2023227946&_cid=P11-MGGE36-91523-1

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Clinical data
Other namesFTP-637
Identifiers
IUPAC name
CAS Number2417135-66-9
PubChem CID158715582
IUPHAR/BPS13205
UNIIKD2MDJ4GAB
KEGGD13123
Chemical and physical data
FormulaC22H18D6N6O3
Molar mass426.506 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  Deng L, Wan L, Liao T, Wang L, Wang J, Wu X, et al. (August 2023). “Recent progress on tyrosine kinase 2 JH2 inhibitors”. International Immunopharmacology121 110434. doi:10.1016/j.intimp.2023.110434PMID 37315371.
  2.  Loo WJ, Turchin I, Prajapati VH, Gooderham MJ, Grewal P, Hong CH, et al. (2023). “Clinical Implications of Targeting the JAK-STAT Pathway in Psoriatic Disease: Emphasis on the TYK2 Pathway”. Journal of Cutaneous Medicine and Surgery27 (1_suppl): 3S – 24S. doi:10.1177/12034754221141680PMID 36519621.

////////Envudeucitinib, Janus kinase inhibitor, anti-inflammatory, Fronthera U.S. Pharmaceuticals, psoriasis, FTP 637

Darbinurad

Darbinurad

CAS 1877347-38-0

MF C18H16N2O2S MW 324.4 g/mol

[1-({[3-(4-cyanophenyl)pyridin-4-yl]sulfanyl}methyl)cyclopropyl]acetic
acid

2-[1-[[3-(4-cyanophenyl)-4-pyridinyl]sulfanylmethyl]cyclopropyl]acetic acid
urate transporter inhibitor, AYFFM7L5F0

Darbinurad is a investigational new drug that is being evaluated for the treatment of gout. It is a selective urate transporter 1 (URAT1) inhibitor that blocks the reabsorption of uric acid within the renal proximal tubule, thereby reducing serum uric acid concentrations.[1][2]

Uric acid is the final metabolite of diet and purine in human body. In vivo environment (pH 7.4, 37 degrees), uric acid is present in blood mainly in the form of sodium salt of uric acid, the serum uric acid value of normal people is generally lower than 6 mg/dL. When uric acid in serum exceeds 7 mg/dL (Shi, et al., Nature 2003, 425: 516-523), sodium salt of uric acid will crystallize out and precipitate on joints and other parts of the body, and result in disorders such as gout, urinary stones, kidney stones, etc. Patients with gout are often accompanied with other complications, including hypertension, diabetes, hyperlipidemia, dyslipidemia, atherosclerosis, obesity, metabolic disease, nephropathy, cardiovascular disease, and respiratory disease, etc. (Rock, Et al., Nature Reviews Rheumatology 2013, 9: 13-23). In 2002, Japanese scientists Endou group reported that anion transport channel protein URAT1 is a major protein responsible for reabsorption of uric acid in kidney, they also found that the blood uric acid in people with URAT1 gene mutation (causing the synthesis of such protein being interrupted, inducing nonfunctional proteins) is only one-tenth of that in normal people (Enomoto et. al., Nature 2002 417: 447-452). These findings in human genetics demonstrate that URAT1 anion transport protein in kidney plays very important role in concentration of uric acid in blood, and indicates that URAT1 is a very good and specific target of a drug for reducing blood uric acid.
      The main objective in the treatment of gout and its complications caused by higher level of blood uric acid is to reduce blood uric acid to lower than 6 mg/dL, the main methods are as follows: 1) to inhibit the generation of uric acid, such as allopurinol, febuxostat, which are drugs for inhibiting Xanthine oxidase; 2) to inhibit the reabsorption of uric acid, such as benzbromarone and probenecid, and lesinurad which is currently in clinical research, all of which are drugs for inhibiting kidney URAT1 anion transport channel protein.
      In addition to URAT1, there are other cation transport channel proteins in kidney, such as Glut9 and OAT1 etc., which are also found to be able to reabsorb uric acid back to blood from renal tubules. Kidney is a major excretion pathway of uric acid in human body (70%), intestinal system (via ABCG2 etc.,) is responsible for excreting approximate 30% of uric acid (Sakurai, et. al., Current Opinion in Nephology and Hypertension 2013, 22: 545-550).
      Human urate anion transporter 1, hURAT1, a member of anion transporter family, is located at luminal surface side of epithelial cells of renal proximal convoluted tubules, mainly participates in the reabsorption of uric acid in renal proximal convoluted tubules. URAT1 accomplishes reabsorption of uric acid and excretion of small amount of uric acid by exchanging univalent anions within cells with uric acid in lumens. Anion transport channel proteins located in renal proximal convoluted tubules also comprise anion transport channel protein OAT4, which has 42% of similarity with URAT1 (amino acids of protein). Therefore, generally, a potent URAT1 inhibitor will also inhibit OAT4 and some other anion transport channel proteins.
      At present, all the clinical drugs for reducing blood uric acid have some side effects, for example, allopurinol will cause life-threatening hypersensitivity in some populations, febuxostat has cardiovascular side effects, and benzbromarone has liver toxicity and has been taken back by Sanofi from some markets. Therefore, it is urgent to search for novel, efficient and low-toxic drugs for reducing blood uric acid, and this will have great clinical significance and application prospects.
      Thioacetate compounds have been reported in the prior art, e.g., a class of phenylthioacetate compounds were reported in CN102939279A, a class of thioacetate compounds were reported in CN103068801A, wherein thioacetate compounds in CN103068801A are obtained from the compounds in CN102939279A by essentially replacing carbons of benzene groups in skeletons of the compounds in CN102939279A with 1 to 4 N atoms.

PAT

US9856239,

https://patentscope.wipo.int/search/en/detail.jsf?docId=US209029213&_cid=P21-MGDFSK-15618-1

Example 12: Synthesis of Compound 20

Step 1: Synthesis of 4-(4-chloropyridin-3-yl)benzonitrile (20-b)

      3-bromo-4-chloropyridine (573 mg, 3 mmol), aqueous solution of sodium carbonate (6 mL, 12 mmol, 2 M), 4-cyanophenylboronic acid (441 mg, 3 mmol) and tetrakis(triphenylphosphine)palladium (0) (173 mg, 0.15 mmol) were added to dioxane (18 mL) in a single-necked flask (50 mL), and then purged with nitrogen 3 times, the mixture was heated to 80° C. and reacted for 5 hours. The reaction solution was cooled, added with ethyl acetate (100 mL), and washed with water (100 mL) and brine (100 mL). The organic phase was dried, filtered, concentrated, and purified by preparative silica gel plate (ethyl acetate/petroleum ether: 1/4) to yield a yellow solid product.

Step 2: Synthesis of methyl 2-(1-(((3-(4-cyanophenyl)pyridin-4-yl)thio) methyl)cyclopropyl)acetate (20-c)

      Methyl 2-(1-(mercaptomethyl)cyclopropyl)acetate (840 mg, 5.25 mmol), potassium carbonate (1.45 g, 10.5 mmol) and 4-(4-chloropyridin-3-yl) benzonitrile (450 mg, 2.1 mmol) were dissolved in dimethyl formamide (20 mL) in a single-necked flask (50 mL), the mixture was heated to 130° C. and reacted for 0.5 hour. The reaction solution was cooled, added with ethyl acetate (100 ml), and washed with water (100 ml) and brine (100×3 mL). The organic phase was dried, filtered, concentrated, and purified by preparative silica gel plate (ethyl acetate/petroleum ether: 1/2) to yield a yellow oily product.

Step 3: Synthesis of 2-(1-(((3-(4-cyanophenyl)pyridin-4-yl)thio)methyl) cyclopropyl)acetic acid (20)

      Methyl 2-(1-(((3-(4-cyanophenyl)pyridin-4-yl)thio)methyl)cyclopropyl) acetate (67 mg, 0.2 mmol) and aqueous solution of sodium hydroxide (0.5 mL, 0.5 mmol, 1 M) were added to methanol (3 mL) in a single-necked flask (50 mL), and the mixture was reacted at room temperature for 5 hours. The reaction solution was adjusted to pH=3 with concentrated hydrochloric acid, concentrated and purified by preparative reverse-phase chromatography to yield a white solid product.
      LC-MS (ES, m/z): 325 [M+H] +; H-NMR (400 MHz, CDCl 3, ppm): δ 8.42 (s, 1H), 8.24 (s, 1H), 7.75 (d, J=8.4 Hz, 2H), 7.53 (d, J=8.4 Hz, 2H), 7.35-7.33 (m, 1H), 3.19 (s, 2H), 2.38 (s, 2H), 0.62-0.60 (m, 4H).

PAT

Carboxylic acid compound, method for preparation thereof, and use thereof

Publication Number: KR-102474640-B1, Priority Date: 2014-08-13, Grant Date: 2022-12-05

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Clinical data
Other namesD-0120
Identifiers
IUPAC name
CAS Number1877347-38-0
PubChem CID118902135
ChemSpider128992995
UNIIAYFFM7L5F0
Chemical and physical data
FormulaC18H16N2O2S
Molar mass324.40 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  Kaufmann D, Chaiyakunapruk N, Schlesinger N (November 2024). “Optimizing gout treatment: A comprehensive review of current and emerging uricosurics”. Joint Bone Spine92 (2) 105826. doi:10.1016/j.jbspin.2024.105826PMID 39622367.
  2.  “Darbinurad”PatSnap.

/////////Darbinurad

Crelosidenib

Crelosidenib

CAS 2230263-60-0

7-{[(1S)-1-(4-{(1S)-1-[4-(prop-2-enoyl)piperazin-1-yl]-2-cyclopropylethyl}phenyl)ethyl]amino}-1-ethyl-1,4-dihydro-2Hpyrimido[4,5-d][1,3]oxazin-2-one
isocitrate dehydrogenase 1 (IDH1) inhibitor, antineoplastic

MF C28H36N6O3 MW 504.6 g/mol

  • LY3410738
  • 7-[[(1S)-1-[4-[(1S)-2-cyclopropyl-1-(4-prop-2-enoylpiperazin-1-yl)ethyl]phenyl]ethyl]amino]-1-ethyl-4H-pyrimido[4,5-d][1,3]oxazin-2-one
  • 7-(((1S)-1-(4-((1S)-2-cyclopropyl-1-(4-prop-2-enoylpiperazin-1-yl)ethyl)phenyl)ethyl)amino)-1-ethyl-4H-pyrimido(4,5-d)(1,3)oxazin-2-one

Crelosidenib is an investigational new drug that is being evaluated for the treatment of cancer. It acts as a selective inhibitor of isocitrate dehydrogenase 1 (IDH1), an enzyme that plays a crucial role in cellular metabolism and is frequently mutated in various cancers, including cholangiocarcinoma.[1][2]

Crelosidenib is an orally available inhibitor of mutant form of the isocitrate dehydrogenase type 1 (IDH1; IDH-1; IDH1 [NADP+] soluble), including the substitution mutation at arginine (R) in position 132, IDH1(R132), with potential antineoplastic activity. Upon oral administration, crelosidenib specifically and covalently binds to and modifies a single cysteine (Cys269) in the allosteric binding pocket of mutant forms of IDH1, thereby inactivating IDH1. This inhibits the formation of the oncometabolite 2-hydroxyglutarate (2HG) from alpha-ketoglutarate (a-KG). This depletes 2-HG levels, prevents 2HG-mediated signaling and leads to both an induction of cellular differentiation and an inhibition of cellular proliferation in tumor cells expressing mutant forms of IDH1. In addition, crelosidenib has the ability to cross the blood-brain barrier (BBB). IDH1 mutations, including IDH1(R132) mutations, are highly expressed in certain malignancies, including gliomas; they initiate and drive cancer growth by both blocking cell differentiation and catalyzing the formation of 2HG.

Syn

example 2 [US11001596B2]

https://patentscope.wipo.int/search/en/detail.jsf?docId=US289829390&_cid=P12-MG4UBU-88518-1

PAT

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Clinical data
Other namesLY3410738
Identifiers
IUPAC name
CAS Number2230263-60-0
PubChem CID135125140
IUPHAR/BPS12340
ChemSpider115009279
UNIIA4DU555RMD
KEGGD12708
Chemical and physical data
FormulaC28H36N6O3
Molar mass504.635 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  Zarei M, Hue JJ, Hajihassani O, Graor HJ, Katayama ES, Loftus AW, et al. (February 2022). “Clinical development of IDH1 inhibitors for cancer therapy”. Cancer Treatment Reviews103 102334. doi:10.1016/j.ctrv.2021.102334PMID 34974243.
  2.  Demir T, Moloney C, Mahalingam D (July 2024). “Emerging targeted therapies and strategies to overcome resistance in biliary tract cancers”. Critical Reviews in Oncology/Hematology199 104388. doi:10.1016/j.critrevonc.2024.104388PMID 38754771.

.///////////Crelosidenib, Antineoplastic, cholangiocarcinoma, LY3410738, LY 3410738

Camibirstat

Camibirstat

CAS 2671128-05-3

N-{(2S)-1-[(4-{6-[(2R,6S)-2,6-dimethylmorpholin-4-yl]pyridin-2-yl}-1,3-thiazol-2-yl)amino]-3-methoxy-1-oxopropan-2-yl}-1-(methanesulfonyl)-1H-pyrrole-3-carboxamide
ATPase inhibitor, antineoplastic

MW C24H30N6O6S2 MF 562.7 g/mol

  • 1H-Pyrrole-3-carboxamide, N-((1S)-2-((4-(6-((2R,6S)-2,6-dimethyl-4-morpholinyl)-2-pyridinyl)-2-thiazolyl)amino)-1-(methoxymethyl)-2-oxoethyl)-1-(methylsulfonyl)-
  • N-[(2S)-1-[[4-[6-[(2S,6R)-2,6-dimethylmorpholin-4-yl]pyridin-2-yl]-1,3-thiazol-2-yl]amino]-3-methoxy-1-oxopropan-2-yl]-1-methylsulfonylpyrrole-3-carboxamide
  • FHD 286

Camibirstat is an investigational new drug that is being evaluated for the treatment of cancer. It is a small molecule that acts as a selective inhibitor of SMARCA2 and SMARCA4, which are key components of the SWI/SNF chromatin remodeling complex.[1]

It is being developed by Foghorn Therapeutics.[2]

Camibirstat is an orally bioavailable, allosteric, small molecule inhibitor of transcription activator BRG1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4; SMARCA4) and BRM (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2; SMARCA2), with potential antineoplastic activity. Upon oral administration, camibirstat targets, binds to, and inhibits the activity of BRG1 and/or BRM, the primary ATPase components and mutually exclusive subunits of the BRG1/BRM-associated factor (BAF) complexes. This may lead to the inhibition of the SWI/SNF chromatin remodeling complex, disrupt chromatin remodeling and gene expression, and result in the downregulation of oncogenic pathways and the inhibition of tumor cell proliferation. BAF is an important regulator of transcriptional programs and gene expression. Mutations in BAF or its transcription factor partners are found in certain diseases including cancers.

PAT

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=US331910582&_cid=P11-MG1TKU-39131-1

Example 1. Preparation of N—((S)-1-((4-(6-(cis-2,6-dimethylmorpholino)pyridin-2-yl)thiazol-2-yl)amino)-3-methoxy-1-oxopropan-2-yl)-1-(methylsulfonyl)-1H-pyrrole-3-carboxamide

      N—((S)-1-((4-(6-(cis-2,6-dimethylmorpholino)pyridin-2-yl)thiazol-2-yl)amino)-3-methoxy-1-oxopropan-2-yl)-1-(methylsulfonyl)-1H-pyrrole-3-carboxamide was synthesized as shown in Scheme 1 below.

Step 7: Preparation of N—((S)-1-((4-(6-(cis-2,6-dimethylmorpholino)pyridin-2-yl)thiazol-2-yl)amino)-3-methoxy-1-oxopropan-2-O-1-(methylsulfonyl)-1H-pyrrole-3-carboxamide

   To a solution of 1-methylsulfonylpyrrole-3-carboxylic acid (Intermediate K) (2.43 g, 12.9 mmol), EDCI (2.69 g, 14.0 mmol), HOBt (1.89 g, 14.0 mmol), and DIPEA (10.2 mL, 58.4 mmol) in dichloromethane (50 mL) was added Intermediate J (5.00 g, 11.7 mmol). After stirring at room temperature for 4 h, the reaction mixture was concentrated under reduced pressure. The residue was diluted with water and extracted three times with ethyl acetate. The combined organic layers were washed three times with saturated aqueous NH 4Cl, once with brine, dried over Na 2SO 4, filtered, and concentrated under reduced pressure to give a residue. The residue was purified by silica gel column chromatography (petroleum ether:ethyl acetate=1:1 to 1:2). The residue was triturated with methyl tert-butyl ether. After 0.5 h, the suspension was filtered, the filter cake was washed with methyl tert-butyl ether, and dried in vacuo. The solid was dissolved in dimethyl sulfoxide (12 mL) and added dropwise to water (800 mL). The suspension was filtered to give wet filter cake. The filter cake was suspended in water and stirred at room temperature. After 1 hour, the solid was collected by filtration, washed three times with water and dried in vacuo to give N—((S)-1-((4-(6-(cis-2,6-dimethylmorpholino)pyridin-2-yl)thiazol-2-yl)amino)-3-methoxy-1-oxopropan-2-yl)-1-(methylsulfonyl)-1H-pyrrole-3-carboxamide (3.9 g, 6.93 mmol, 59.3% yield) as a white solid.
      LCMS (ESI) m/z: [M+H] +=563.1.
       1H NMR (400 MHz, DMSO-d6) δ 12.49 (br s, 1H), 8.51 (d, J=7.2 Hz, 1H), 7.98-7.97 (m, 1H), 7.78 (s, 1H), 7.67-7.57 (m, 1H), 7.29-7.27 (m, 1H), 7.26 (d, J=7.2 Hz, 1H), 6.88-6.74 (m, 2H), 4.94-4.91 (m, 1H), 4.25 (d, J=11.6 Hz, 2H), 3.77-3.67 (m, 2H), 3.63-3.62 (m, 2H), 3.57 (s, 3H), 3.31 (s, 3H), 2.44-2.38 (m, 2H), 1.18 (d, J=6.0 Hz, 6H).

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Clinical data
Other namesFHD286
Identifiers
IUPAC name
CAS Number2671128-05-3
PubChem CID156818030
ChemSpider115010237
UNIIQHA5XLA4SA
ChEMBLChEMBL5095181
Chemical and physical data
FormulaC24H30N6O6S2
Molar mass562.66 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  Yu L, Wu D (July 2024). “SMARCA2 and SMARCA4 Participate in DNA Damage Repair”Frontiers in Bioscience (Landmark Edition)29 (7): 262. doi:10.31083/j.fbl2907262PMID 39082357.
  2.  “Camibirstat”PatSnap.

/////////////Camibirstat, ATPase inhibitor, antineoplastic, Foghorn Therapeutics, FHD 286

Brimarafenib

Brimarafenib

CAS 1643326-82-2

MF C24H17F3N4O4 MW482.4 g/mol

N-{(1S,1aS,6bS)-5-[(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-4-yl)oxy]-1a,6b-dihydro-1H-cyclopropa[b]benzofuran-1-yl}-N′-(2,4,5-trifluorophenyl)urea
rapidly accelerated fibrosarcoma (Raf) kinase inhibitor,

  • 1-((1S,1aS,6bS)-5-((7-oxo-6,8-dihydro-5H-1,8-naphthyridin-4-yl)oxy)-1a,6b-dihydro-1H-cyclopropa(b)(1)benzofuran-1-yl)-3-(2,4,5-trifluorophenyl)urea
  • 1-[(1S,1aS,6bS)-5-[(7-oxo-6,8-dihydro-5H-1,8-naphthyridin-4-yl)oxy]-1a,6b-dihydro-1H-cyclopropa[b][1]benzofuran-1-yl]-3-(2,4,5-trifluorophenyl)urea

Antineoplastic, MapKure, LLC, SpringWorks Therapeutics, BeiGene, BGB-3245, BGB 3245, GXS33OY2CB

Brimarafenib is an investigational new drug that is being evaluated for the treatment of cancer. It targets the proto-oncogene BRAF with activating mutations BRAF mutations (such as V600E), non-V600 BRAF mutations, and RAF fusions.[1][2]

It is being developed by MapKure, LLC, a joint venture between SpringWorks Therapeutics and BeiGene.[1]

Brimarafenib is an orally available inhibitor of both monomer and dimer forms of activating mutations of the serine/threonine-protein kinase BRAF (B-raf) protein, including V600 BRAF mutations, non-V600 BRAF mutations, and RAF fusions, with potential antineoplastic activity. Upon administration, brimarafenib targets and binds to both monomeric and dimeric forms of activating BRAF mutations and fusions. This may result in the inhibition of BRAF-mediated signaling and inhibit proliferation in tumor cells expressing BRAF mutations and fusions. BRAF belongs to the RAF family of serine/threonine protein kinases and plays a role in regulating the mitogen-activated protein kinase (MAPK)/ extracellular signal-regulated kinase (ERK) signaling pathway, which is often dysregulated in human cancers and plays a key role in tumor cell proliferation and survival. BRAF mutations and fusions have been identified in a number of solid tumors and are drivers of cancer growth.

PAT

PAT

https://patentscope.wipo.int/search/en/detail.jsf?docId=WO2014206343&_cid=P22-MG0802-32937-1

PAT

Fused tricyclic urea compounds as raf kinase and/or raf kinase dimer inhibitors

Publication Number: WO-2014206343-A1

Priority Date: 2013-06-28

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Clinical data
Other namesBGB-3245
Identifiers
IUPAC name
CAS Number1643326-82-2
PubChem CID117807031
IUPHAR/BPS13203
ChemSpider129144353
UNIIGXS33OY2CB
Chemical and physical data
FormulaC24H17F3N4O4
Molar mass482.419 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

References

  1.  “Brimarafenib”.
  2.  Tellenbach FL, Seiler LL, Johnson M, Rehrauer H, Schukla P, Martinez-Gomez J, et al. “Combination of the Novel Raf Dimer Inhibitor Brimarafenib with the Mek Inhibitor Mirdametinib is Effective Against Nras Mutant Melanoma”SSRN: 4934723. doi:10.2139/ssrn.4934723.

///////Brimarafenib, Antineoplastic, MapKure, LLC, SpringWorks Therapeutics, BeiGene, BGB-3245, BGB 3245, GXS33OY2CB

Brezivaptan

Brezivaptan

CAS 1370444-22-6

ANC-501THY-1773TS-121, 575OB1CKN0

MF C25H30ClN5O3 MW 484.0 g/mol

2-[3-(3-chlorophenyl)-1-{4-[2-(morpholin-4-yl)ethyl]phenyl}-5-oxo-1,5-dihydro-4H-1,2,4-triazol-4-yl]-N-(propan-2-yl)acetamide

2-[3-(3-chlorophenyl)-1-[4-(2-morpholin-4-ylethyl)phenyl]-5-oxo-1,2,4-triazol-4-yl]-N-propan-2-ylacetamide
vasopressin receptor antagonist

  • ANC-501 in the Treatment of Adults With Major Depressive DisorderCTID: NCT05439603Phase: Phase 2Status: CompletedDate: 2024-12-31
  • A Study to Evaluate the Safety and Efficacy of TS-121 as an Adjunctive Treatment for Major Depressive DisorderCTID: NCT03093025Phase: Phase 2Status: TerminatedDate: 2020-07-14
  • Exploratory Study Using Positron Emission Tomography With TS-121 and [11C]TASP0410699 in Healthy Adult Male SubjectsCTID: NCT02448212Phase: Phase 1Status: CompletedDate: 2017-02-14

Brezivaptan[1] (developmental code names ANC-501THY-1773TS-121) is an orally activeselective vasopressin V1B receptor antagonist which is under development by Taisho Pharmaceutical for the adjunctive treatment of major depressive disorder.[2][3][4] As of November 2022, it is in phase II clinical trials for this indication.[2][3][5]

ANC-501 is under investigation in clinical trial NCT05439603 (ANC-501 in the Treatment of Adults With Major Depressive Disorder).

SYN

https://patentscope.wipo.int/search/en/detail.jsf?docId=US90328697&_cid=P11-MFYT6K-98384-1

Synthesis of Example Aa-1

2-[3-(3-Chlorophenyl)-1-{4-[2-(morpholin-4-yl)ethyl]phenyl}-5-oxo-1,5-dihydro-4H-1,2,4-triazol-4-yl]-N-(propan-2-yl)acetamide

A mixture of the compound (100 mg) prepared in Reference Example P-I1, morpholine (0.03 mL), N,N-diisopropylethylamine (0.35 mL), and MeCN (3.00 mL) was stirred at an outside temperature of 80° C. overnight. After cooling, the solvent was distilled off under reduced pressure. The residue was purified by column chromatography (SNAP Cartridge HP-Sil: 10 g, mobile phase: CHCl 3/MeOH=98/2 to 85/15 (v/v); and SNAP Cartridge KP-NH: 28 g, mobile phase: n-hexane/CHCl 3=80/20 to 0/100 (v/v)) and preparative thin-layer chromatography (PTLC) (1.0 mm silica gel 60F 254 plate, mobile phase: EtOAc/MeOH=95/5 (v/v)). The resulting crude product was washed with a solvent mixture of EtOAc and n-hexane (EtOAc/n-hexane=1/4 (v/v)) with stirring to yield the title compound (70 mg, colorless solid).
      MS (ESI pos.) m/z: 484 ([M+H] +).
       1H-NMR (600 MHz, CDCl 3)δ(ppm); 1.20 (6H, d, J=6.4 Hz), 2.48-2.67 (6H, m), 2.80-2.88 (2H, m), 3.76 (4H, br. s.), 4.06-4.13 (1H, m), 4.36 (2H, s), 6.37-6.45 (1H, m), 7.31 (2H, d, J=8.3 Hz), 7.46-7.50 (1H, m), 7.51-7.55 (1H, m), 7.74-7.77 (1H, m), 7.85-7.88 (1H, m), 7.94 (2H, d, J=8.7 Hz).

PAT

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References

  1.  PubChem. “Brezivaptan”pubchem.ncbi.nlm.nih.gov. Retrieved 2024-08-15.
  2.  “TS 121 -“AdisInsight. Springer Nature Switzerland AG.
  3.  “New Drug Pipeline – Taisho Pharmaceutical Holdings”.
  4.  Kamiya M, Sabia HD, Marella J, Fava M, Nemeroff CB, Umeuchi H, Iijima M, Chaki S, Nishino I (September 2020). “Efficacy and safety of TS-121, a novel vasopressin V1B receptor antagonist, as adjunctive treatment for patients with major depressive disorder: A randomized, double-blind, placebo-controlled study”Journal of Psychiatric Research128: 43–51. doi:10.1016/j.jpsychires.2020.05.017PMID 32521250S2CID 219587135.
  5.  Inatani S, Mizuno-Yasuhira A, Kamiya M, Nishino I, Sabia HD, Endo H (May 2021). “Prediction of a clinically effective dose of THY1773, a novel V1B receptor antagonist, based on preclinical data”Biopharmaceutics & Drug Disposition42 (5): 204–217. doi:10.1002/bdd.2273PMC 8252455PMID 33734452.
  • Clinical trial number NCT03093025 for “A Study to Evaluate the Safety and Efficacy of TS-121 as an Adjunctive Treatment for Major Depressive Disorder” at ClinicalTrials.gov
Clinical data
Other namesTS-121; TS121; TS-1211; TS1211; THY1773; THY-1773; ANC-501; ANC501
Routes of
administration
By mouth
Identifiers
IUPAC name
CAS Number1370444-22-6
PubChem CID56952080
DrugBankDB18907
ChemSpider129325033
UNII575OB1CKN0
ChEMBLChEMBL5314910
Chemical and physical data
FormulaC25H30ClN5O3
Molar mass484.00 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

////////////Brezivaptan, ANC-501THY-1773TS-121, ANC 501THY 1773TS 121, 575OB1CKN0

Ateganosine

Ateganosine

CAS 789-61-7

MF C10H13N5O3S MW 283.31 g/mol

2′-deoxy-6-thioguanosine
nucleoside analogue, antineoplastic

  • 6-THIO-2′-DEOXYGUANOSINE
  • 2′-Deoxythioguanosine
  • TGdR
  • Thioguanine deoxyriboside
  • KR0RFB46DF
  • NSC-71261

Ateganosine is a telomerase inhibitor[1] and apoptosis inducer currently under investigation for the treatment of various cancers, including non-small cell lung cancer (NSCLC).[2]

Beta-Thioguanine Deoxyriboside is a thiopurine nucleoside derivative with antineoplastic activity. After conversion to the triphosphate, beta-thioguanine deoxyriboside is incorporated into DNA, resulting in inhibition of DNA replication. This agent is cytotoxic against leukemia cell lines and has demonstrated some activity against leukemia cells in vivo. Beta-thioguanine deoxyriboside demonstrates antineoplastic activity against 6-thioguanine-resistant tumor cells. (NCI04)

  • THIO Sequenced With Cemiplimab in Advanced NSCLCCTID: NCT05208944Phase: Phase 2Status: RecruitingDate: 2025-05-31
  • A Phase III Study With THIO + Cemiplimab vs Chemotherapy as 3rd Line Treatment in Advanced/Metastatic NSCLCCTID: NCT06908304Phase: Phase 3Status: Not yet recruitingDate: 2025-04-08

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References

  1.  Eglenen-Polat B, Kowash RR, Huang HC, Siteni S, Zhu M, Chen K, et al. (January 2024). “A telomere-targeting drug depletes cancer initiating cells and promotes anti-tumor immunity in small cell lung cancer”Nature Communications15 (1) 672. Bibcode:2024NatCo..15..672Edoi:10.1038/s41467-024-44861-8PMC 10803750PMID 38253555.
  2.  “Ateganosine”PatSnap.
Clinical data
Other names2′-Deoxythioguanosine
Identifiers
IUPAC name
CAS Number789-61-7
PubChem CID3000603
DrugBankDB18117
ChemSpider2272164
UNIIKR0RFB46DF
KEGGD13071
ChEMBLChEMBL3250476
CompTox Dashboard (EPA)DTXSID4021345 
Chemical and physical data
FormulaC10H13N5O3S
Molar mass283.31 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

////////Ateganosine, nucleoside analogue, antineoplastic, 6-THIO-2′-DEOXYGUANOSINE, 2′-Deoxythioguanosine, TGdR, Thioguanine deoxyriboside, KR0RFB46DF, fast track designation, NSC-71261, NSC 71261

Bimokalner

Bimokalner

CAS 2243284-19-5

MF C15H18F5NOS MW 355.4 g/mol

  • KEY5KKX6QY
  • orb2663976
  • (1S,2S,4R)-N-[[3-(pentafluoro-λ6-sulfanyl)phenyl]methyl]bicyclo[2.2.1]heptane-2-carboxamide

(1S,2S,4R)-N-{[3-(pentafluoro-λ6sulfanyl)phenyl]methyl} bicyclo[2.2.1]heptane-2-carboxamide
voltage-gated potassium channel (Kv7.4) agonist

Bimokalner is an investigational new drug under evaluation for preventing and treating hearing loss caused by cisplatin treatment. It is a voltage-gated potassium channel agonist targeting Kv7.4 and is being developed by Acousia Therapeutics GmbH.[1][2]

PAT

Compounds useful as potassium channel openers, Publication Number: US-11884642-B2, Priority Date: 2017-02-28, Grant Date: 2024-01-30

PAT

(1R,2R,4S)-rel-N-(3-(pentafluorosulfanyl)benzyl)bicyclo[2.2.1]heptane-2-carboxamide

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References

  1.  “Bimokalner”PatSnap.
  2.  Tavanai E, Rahimi V, Khalili ME, Falahzadeh S, Motasaddi Zarandy M, Mohammadkhani G (2024). “Age-related hearing loss: An updated and comprehensive review of the interventions”Iranian Journal of Basic Medical Sciences27 (3): 256–269. doi:10.22038/IJBMS.2023.72863.15849PMC 10849199PMID 38333758.
Clinical data
Other namesACOU085
Identifiers
IUPAC name
CAS Number2243284-19-5
PubChem CID135309173
UNIIKEY5KKX6QY
Chemical and physical data
FormulaC15H18F5NOS
Molar mass355.37 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

///////////Bimokalner, Acousia Therapeutics, KEY5KKX6QY, orb 2663976

Abarelix

Abarelix

CAS 183552-38-7

785804-17-3 (acetate) 183552-38-7 (free base)

PPI149, PPI-149, PPI 149, R3827, R-3827, R 3827, Abarelix, Abarelix acetate, Plenaxis,
W486SJ5824

Chemical Formula: C72H95ClN14O14

Exact Mass: 1414.6841

Molecular Weight: 1416.06

Ac-D-Nal-[D-(pCl)Phe]-D-Pal-Ser-[Nalpha-Me-Tyr]-D-Asn-Leu-ILys-Pro-DAla-NH2

(2R)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2R)-2-[[(2R)-2-acetamido-3-naphthalen-2-ylpropanoyl]amino]-3-(4-chlorophenyl)propanoyl]amino]-3-pyridin-3-ylpropanoyl]amino]-3-hydroxypropanoyl]-methylamino]-3-(4-hydroxyphenyl)propanoyl]amino]-N-[(2S)-1-[[(2S)-1-[(2S)-2-[[(2R)-1-amino-1-oxopropan-2-yl]carbamoyl]pyrrolidin-1-yl]-1-oxo-6-(propan-2-ylamino)hexan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]butanediamide

(2R)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2R)-2-[[(2R)-2-acetamido-3-naphthalen-2-ylpropanoyl]amino]-3-(4-chlorophenyl)propanoyl]amino]-3-pyridin-3-ylpropanoyl]amino]-3-hydroxypropanoyl]-methylamino]-3-(4-hydroxyphenyl)propanoyl]amino]-N-[(2S)-1-[[(2S)-1-[(2S)-2-[[(2R)-1-amino-1-oxopropan-2-yl]carbamoyl]pyrrolidin-1-yl]-1-oxo-6-(propan-2-ylamino)hexan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]butanediamide

Abarelix is a synthetic decapeptide and antagonist of naturally occurring gonadotropin-releasing hormone (GnRH). Abarelix directly and competitively binds to and blocks the gonadotropin releasing hormone receptor in the anterior pituitary gland, thereby inhibiting the secretion and release of luteinizing hormone (LH) and follicle stimulating hormone (FSH). In males, the inhibition of LH secretion prevents the release of testosterone. As a result, this may relieve symptoms associated with prostate hypertrophy or prostate cancer, since testosterone is required to sustain prostate growth.

Abarelix, sold under the brand name Plenaxis, is an injectable gonadotropin-releasing hormone antagonist (GnRH antagonist) which is marketed in Germany and the Netherlands. It is primarily used in oncology to reduce the amount of testosterone made in patients with advanced symptomatic prostate cancer for which no other treatment options are available.[2][3]

It was originally marketed by Praecis Pharmaceuticals as Plenaxis,[2] and is now marketed by Speciality European Pharma in Germany[4] after receiving a marketing authorization in 2005. The drug was introduced in the United States in 2003, but was discontinued in this country in May 2005 due to poor sales and a higher-than-expected incidence of severe allergic reactions.[5] It remains marketed in Germany and the Netherlands however.[6]

Pat

https://patents.google.com/patent/CN107778354B/en

Example 1: synthesis of peptide resin 1

Dissolving 0.15mol of Fmoc-D-Ala and 0.15mol of HOBt by using a proper amount of DMF; and adding 0.15mol DIC slowly into the protected amino acid DMF solution under stirring, and reacting for 30 minutes under stirring at room temperature to obtain an activated protected amino acid solution for later use.

Taking 0.05mol of MOBHA resin (the substitution value is about 0.6mmol/g), swelling with DMF for 25 minutes, washing and filtering, adding the activated solution, stirring at room temperature for reaction for 3 hours, pumping out the reaction solution, washing with DMF for 3 times, washing with DCM for 3 times, wherein the washing time is 3min each time, obtaining Fmoc-D-Ala-MOBHA resin, namely the peptide resin 1, removing Fmoc protection with 20% PIP/DMF solution for 25 minutes before carrying out the next coupling reaction, washing and filtering to obtain the D-Ala-MOBHA resin.

Example 2: synthesis of peptide resin 1

Dissolving 0.15mol of Boc-D-Ala and 0.15mol of HOBt with a proper amount of DMF; and adding 0.15mol DIC slowly into the protected amino acid DMF solution under stirring, and reacting for 30 minutes under stirring at room temperature to obtain an activated protected amino acid solution for later use.

Taking 0.05mol of MOBHA resin (the substitution value is about 0.6mmol/g), swelling with DMF for 25 minutes, washing and filtering, adding an activated Fmoc-D-Ala solution, stirring at room temperature for 3 hours, pumping out the reaction solution, washing 3 times with DMF, washing 3 times with DCM, wherein each washing time is 3min, obtaining Boc-D-Ala-MOBHA resin, namely peptide resin 1, deprotecting with 30% TFA/DCM solution for 30 minutes, neutralizing with DIEA/DCM solution, washing and filtering with DMF and DCM, and obtaining D-Ala-MOBHA resin.

Example 3: synthesis of Abarelix peptide resin

Dissolving 0.15mol of Fmoc-Pro and 0.15mol of HOBt in a proper amount of DMF; and adding 0.15mol DIC slowly into the protected amino acid DMF solution under stirring, and reacting for 30 minutes under stirring at room temperature to obtain an activated protected amino acid solution for later use.

Adding the activated Fmoc-Pro solution into the peptide resin 1 obtained in example 1, stirring at room temperature for reaction for 3 hours, pumping out the reaction solution, washing with DMF for 3 times, washing with DCM for 3 minutes each time, removing Fmoc protection with 20% PIP/DMF solution for 25 minutes, washing and filtering to obtain Pro-D-Ala-MOBHA resin.

Boc-Lys (iPr, Z), Fmoc-Leu, Fmoc-D-Asn (Trt), Fmoc-N-Me-Tyr (tBu), Fmoc-Ser (tBu), Fmoc-D-Pal, Fmoc-D-Cpa and Ac-D-Nal are sequentially added in the same method, and the Abarelix peptide resin, Ac-D-Nal-D-Cpa-D-Pal-Ser (tBu) -N-Me-Tyr (tBu) -D-Asn (Trt) -Leu-Lys (iPr, Z) -Pro-D-Ala-MOBHA resin are obtained by washing and filtering.

Example 4: synthesis of Abarelix peptide resin

Dissolving 0.15mol of Boc-Pro and 0.15mol of HOBt by using a proper amount of DMF; and adding 0.15mol DIC slowly into the protected amino acid DMF solution under stirring, and reacting for 30 minutes under stirring at room temperature to obtain an activated protected amino acid solution for later use.

Adding the activated Boc-Pro solution into the peptide resin 1 obtained in example 1, stirring at room temperature for reaction for 3 hours, pumping out the reaction solution, washing with DMF for 3 times, washing with DCM for 3min each time, deprotecting with 30% TFA/DCM solution for 30 minutes, neutralizing with DIEA/DCM solution, washing with DMF and DCM, and filtering to obtain Pro-D-Ala-MBHA resin.

Boc-Lys (iPr, Z), Fmoc-Leu, Fmoc-D-Asn (Trt), Fmoc-N-Me-Tyr (tBu), Fmoc-Ser (tBu), Fmoc-D-Pal, Fmoc-D-Cpa and Ac-D-Nal are sequentially added in the same method, and the Abarelix peptide resin, Ac-D-Nal-D-Cpa-D-Pal-Ser (tBu) -N-Me-Tyr (tBu) -D-Asn (Trt) -Leu-Lys (iPr, Z) -Pro-D-Ala-MOBHA resin are obtained by washing and filtering.

Example 5: preparation of crude Abarelix

Taking the abarelix peptide resin prepared in the example 3, adding 8% HBr/TFA solution (acidolysis solution 10mL/g abarelix resin), stirring and reacting for 6 hours, filtering and collecting filtrate, washing the resin with a small amount of TFA for 3 times, combining the filtrates, concentrating under reduced pressure, adding anhydrous ether for precipitation, washing the precipitate with anhydrous ether for 3 times, and draining to obtain white-like powder, namely a crude product of abarelix, wherein the purity of the crude product is 79.3%.

Example 6: preparation of crude Abarelix

Taking the abarelix peptide resin prepared in the example 4, adding 8% HBr/TFA solution (acidolysis solution 10mL/g abarelix resin), stirring and reacting for 6 hours, filtering and collecting filtrate, washing the resin with a small amount of TFA for 3 times, combining the filtrates, concentrating under reduced pressure, adding anhydrous ether for precipitation, washing the precipitate with anhydrous ether for 3 times, and draining to obtain white-like powder, namely a crude product of abarelix, wherein the purity of the crude product is 77.4%.

Example 7: purification and trans-salt conversion of crude Abarelix

Taking the crude Abarelix product obtained in the example 5, dissolving the Abarelix product in 20 percent acetic acid solution, filtering the solution by using a 0.45 mu m microporous membrane, and purifying for later use;

purifying by high performance liquid chromatography, wherein a chromatographic filler is 10 mu m reverse phase C18, a mobile phase system is 0.1% TFA/water solution-0.1% TFA/acetonitrile solution, a chromatographic column with the flow rate of 77mm x 250mm is 90mL/min, eluting by a gradient system, circularly sampling and purifying, sampling a crude product solution in the chromatographic column, starting the mobile phase for elution, collecting a main peak, and evaporating acetonitrile to obtain an abarelix purified intermediate concentrated solution;

taking the Abarelix purified intermediate concentrated solution, and filtering with a 0.45-micrometer filter membrane for later use;

performing salt exchange by high performance liquid chromatography, wherein the mobile phase system is 1% acetic acid/water solution-acetonitrile, the purification is performed by reversed phase C18 with chromatographic packing of 10 μm, the flow rate of a chromatographic column of 77mm × 250mm is 90mL/min, gradient elution and circular sample loading method are adopted, the sample is loaded in the chromatographic column, the mobile phase elution is started, the chromatogram is collected, the change of the absorbance is observed, the main peak of salt exchange is collected and the purity is detected by analyzing the liquid phase, the main peak solutions of salt exchange are combined, the concentration is performed under reduced pressure to obtain the aqueous solution of abarelix acetic acid, and freeze drying is performed to obtain 39.4g abarelix pure product

The total yield was 55.6%, molecular weight: 1417.2, purity: 99.6%, maximum single impurity of 0.13%, no toxic hydantoin degradation products were detected.

Example 8: purification and trans-salt conversion of crude Abarelix

Taking the crude Abarelix product obtained in the example 6, dissolving the Abarelix product by using a purification mobile phase A, and filtering the solution by using a 0.45 mu m microporous filter membrane to purify the Abarelix product for later use;

purifying by high performance liquid chromatography, wherein a chromatographic filler is 10 mu m reverse phase C18, a mobile phase system is 0.1% TFA/water solution-0.1% TFA/acetonitrile solution, a chromatographic column with the flow rate of 77mm x 250mm is 90mL/min, eluting by a gradient system, circularly sampling and purifying, sampling a crude product solution in the chromatographic column, starting the mobile phase for elution, collecting a main peak, and evaporating acetonitrile to obtain an abarelix purified intermediate concentrated solution;

taking the Abarelix purified intermediate concentrated solution, and filtering with a 0.45-micrometer filter membrane for later use;

performing salt exchange by adopting a high performance liquid chromatography, wherein a mobile phase system is 1% acetic acid/water solution-acetonitrile, a chromatographic filler for purification is reversed phase C18 with the diameter of 10 mu m, the flow rate of a chromatographic column with the diameter of 77mm × 250mm is 90mL/min, a gradient elution method and a circular sample loading method are adopted, loading the chromatographic column, starting the mobile phase elution, collecting a spectrum, observing the change of the absorbance, collecting a main salt exchange peak, detecting the purity by using an analysis liquid phase, combining main salt exchange peak solutions, concentrating under reduced pressure to obtain an abarelix acetic acid water solution, and performing freeze drying to obtain 41.7g of an abarelix pure product.

The total yield is 58.9%, molecular weight: 1417.0, purity: 99.5%, maximum single impurity 0.09%, no toxic hydantoin degradation products were detected.

SYN

Ma, Zhonggang; Guo, Dewen; Zeng, Dezhi; Wen, Yongjun. Method for synthesizing abarelix. Assignee Chengdu Shengnuo Biopharm Co., Ltd.. 2018.

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1: Tombal B. New treatment paradigm for prostate cancer: abarelix initiation therapy for immediate testosterone suppression followed by a luteinizing hormone-releasing hormone agonist. BJU Int. 2012 Mar;109(6):E16; author reply E16-7. doi: 10.1111/j.1464-410X.2012.10983.x. PubMed PMID: 22360806.

2: Garnick MB, Mottet N. New treatment paradigm for prostate cancer: abarelix initiation therapy for immediate testosterone suppression followed by a luteinizing hormone-releasing hormone agonist. BJU Int. 2012 Aug;110(4):499-504. doi: 10.1111/j.1464-410X.2011.10708.x. Epub 2011 Nov 16. PubMed PMID: 22093775.

3: Koechling W, Hjortkjaer R, Tankó LB. Degarelix, a novel GnRH antagonist, causes minimal histamine release compared with cetrorelix, abarelix and ganirelix in an ex vivo model of human skin samples. Br J Clin Pharmacol. 2010 Oct;70(4):580-7. doi: 10.1111/j.1365-2125.2010.03730.x. PubMed PMID: 20840449; PubMed Central PMCID: PMC2950992.

4: Retraction statement: Reconstitution of Plenaxis® (Abarelix) 100 mg for injection is more effective with a vortex-like mixer than when performed manually. J Pharm Pract. 2010 Feb;23(1):78. doi: 10.1177/0897190009360369. PubMed PMID: 21507797.

5: Kirby RS, Fitzpatrick JM, Clarke N. Abarelix and other gonadotrophin-releasing hormone antagonists in prostate cancer. BJU Int. 2009 Dec;104(11):1580-4. doi: 10.1111/j.1464-410X.2009.08924.x. Review. PubMed PMID: 20053189.

6: Debruyne F, Bhat G, Garnick MB. Abarelix for injectable suspension: first-in-class gonadotropin-releasing hormone antagonist for prostate cancer. Future Oncol. 2006 Dec;2(6):677-96. Review. PubMed PMID: 17155895.

7: Beer TM, Ryan C, Bhat G, Garnick M; Abarelix Study Group. Dose-escalated abarelix in androgen-independent prostate cancer: a phase I study. Anticancer Drugs. 2006 Oct;17(9):1075-9. PubMed PMID: 17001181.

8: Hogle WP. Abarelix (plenaxis). Clin J Oncol Nurs. 2004 Dec;8(6):663-5. PubMed PMID: 15637961.

9: Mongiat-Artus P, Teillac P. Abarelix: the first gonadotrophin-releasing hormone antagonist for the treatment of prostate cancer. Expert Opin Pharmacother. 2004 Oct;5(10):2171-9. Review. PubMed PMID: 15461552.

10: Wong SL, Lau DT, Baughman SA, Fotheringham N, Menchaca D, Garnick MB. Pharmacokinetics and pharmacodynamics of a novel depot formulation of abarelix, a gonadotropin-releasing hormone (GnRH) antagonist, in healthy men ages 50 to 75. J Clin Pharmacol. 2004 May;44(5):495-502. PubMed PMID: 15102870.

References

  1.  “Abarelix”PubChem. 2017-07-29.
  2.  “Abarelix”Drugs.com. Archived from the original on 2018-02-10. Retrieved 2018-01-23.
  3.  Boccon-Gibod L, van der Meulen E, Persson BE (June 2011). “An update on the use of gonadotropin-releasing hormone antagonists in prostate cancer”Therapeutic Advances in Urology3 (3): 127–40. doi:10.1177/1756287211414457PMC 3159401PMID 21904569.
  4.  Pharmazeutische Zeitung online: Abarelix (in German)
  5.  Minev B (13 January 2011). Cancer Management in Man: Chemotherapy, Biological Therapy, Hyperthermia and Supporting Measures. Springer Science & Business Media. pp. 182–. ISBN 978-90-481-9704-0.
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Clinical data
Trade namesPlenaxis
AHFS/Drugs.comMonograph
Routes of
administration
Intramuscular injection
Drug classGnRH analogueGnRH antagonistAntigonadotropin
ATC codeL02BX01 (WHO)
Pharmacokinetic data
Protein binding96–99%
Identifiers
IUPAC name
CAS Number183552-38-7 
PubChem CID16131215
IUPHAR/BPS1188
DrugBankDB00106 
ChemSpider10482301 
UNIIW486SJ5824
KEGGD02738 
ChEBICHEBI:337298 
ChEMBLChEMBL1252 
CompTox Dashboard (EPA)DTXSID20171443 
Chemical and physical data
FormulaC72H95ClN14O14
Molar mass1416.09 g·mol−1
3D model (JSmol)Interactive image
SMILES
InChI

//////Abarelix, PPI149, PPI-149, PPI 149, R3827, R-3827, R 3827, Abarelix, Abarelix acetate, Plenaxis,
W486SJ5824


O=C(N[C@@H](CC(C)C)C(N[C@@H](CCCCNC(C)C)C(N1[C@H](C(N[C@H](C)C(N)=O)=O)CCC1)=O)=O)[C@H](NC([C@@H](N(C([C@@H](NC([C@H](NC([C@H](NC([C@H](NC(C)=O)CC2=CC=C3C=CC=CC3=C2)=O)CC4=CC=C(Cl)C=C4)=O)CC5=CC=CN=C5)=O)CO)=O)C)CC6=CC=C(O)C=C6)=O)CC(N)=O